RNA id: XM_036990022.1



Basic Information


Item Value
RNA id XM_036990022.1
length 1232
RNA type mRNA
GC content 0.52
exon number 5
gene id arl10
representative True

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28643569 ~ 28648218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


attacatgATTAAAACTCAAGAGGCTTCATCCACATCACACAAGTAGCAGTTGCCCAGCCCATACACTGCCGTCACGAATCCAACGGATTGAAGGGTACAAGGCGCTGGCGGGGCTCTTCAACACAAACAAGGAAGAGATATCACGTGCACTGGTTACAGTGGAAATCATTCCGTCAGTTCATCGTTGGCTCTTGGTTGCTGTGTCCAGGAAGACAACATTATACGGCGTTTAAGCAGTGCCACATGGTTCTGCTTCGGCACATATCCATCGCCCTAACCGCCGCGGTGGCTGCCTTCGGGTCCGCGCTGTTTATCGCCTTGAATTATTTCTACAGAAGGCGAATATGGTCTCCCGAAGCGGAATATTACATGATAAAAGAGGAGCACGAGGAGCGTGGAAAGCGCCAGGTGCTTGTCCTTGGCCTAGACGGTGCTGGGAAGAGCAGTATCCTGCAGGGGCTGACAGCTGGAGACGGGGGCAAGAGAGGGCACTGCCGCCCCACCAGGGGCTTCAACTTTATGAGCCTCAGTGCTCCTGCCTGTCAGCTGGATTTCCTTGAGATTGGAGGGGGTGAGGATTTGCGTACGTACTGGACCGAGTACCTGAGGAAGACGCATGTCCTGGTGTACGTGGTTGACTCCTCTGACAGAAAACGTCTCCCACAGGCCAAGGCTGAGCTGCATCGCCTTCTCAGACTGGATTCACaacttcctgtggtggtcctgggAAACAAACAGGACAAGCACAACGCCATGAGTGTGTCGGAGCTCCATGAGGCCCTGTCTCTGGGGGCGGTGGCTGACGATAGGAGGCTGTTCCTCCTGGCTGCCCAGCTGGGCTCAGACGACCTGATTGTCTCCCGCAATCTGCAGGCCTTCCAAGACCTGATCCTACAGCTCGTTTGATTCCCTAGGACAGGATGAGTTGAACTGGGGGTTGACCATGCaggtgggatgggggagaggccCATGGGTGAGCCCGTGTATCTCCAGATTGTCAATTCCCCTCACCCCAAAAAGTTGCTCTTGAATCTCTGGACCAATCAGAATGAAGCAAATGCAGGTACCACAACAGCTGGCAGTGGTCCGTAGTTTTTTGGCAAGCAGTCAGCAACAgtgaaatacagtggggcaaaaaagtattttagtcagccaccaattgtgcaagttttcccaatTAAAAAGattaggcctgtaattttcatcataggtacacttaaactatgacaga

Function


GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07958 ARL10; ADP-ribosylation factor-like protein 10

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU995787 lncRNA downstream 73 28642298 ~ 28643496 (-) True G874748
TU995804 lncRNA downstream 13268 28630013 ~ 28630301 (-) True G874765
TU995780 lncRNA downstream 69366 28573987 ~ 28574203 (-) True G874741
TU995738 lncRNA downstream 97142 28545269 ~ 28546427 (-) True G874707
TU995739 lncRNA downstream 97707 28544079 ~ 28545862 (-) False G874707
TU995916 lncRNA upstream 174433 28822651 ~ 28822889 (-) True G874863
TU995928 lncRNA upstream 180455 28828673 ~ 28828931 (-) True G874875
TU996227 lncRNA upstream 245226 28893444 ~ 28893677 (-) True G875167
TU996228 lncRNA upstream 248073 28896291 ~ 28896686 (-) True G875168
TU996189 lncRNA upstream 253909 28902127 ~ 28926237 (-) False G875132
XM_021617994.2 mRNA downstream 19220 28579433 ~ 28624349 (-) True LOC110533606
XM_021617993.2 mRNA downstream 83554 28549463 ~ 28560015 (-) True LOC110533605
XR_002474999.2 mRNA downstream 250459 28389089 ~ 28393110 (-) False LOC110533602
XM_036990016.1 mRNA downstream 264207 28361976 ~ 28379362 (-) True LOC110533600
XM_036990015.1 mRNA downstream 274951 28361976 ~ 28368618 (-) False LOC110533600
XM_021618005.2 mRNA upstream 83585 28731803 ~ 28755968 (-) False LOC110533612
XM_021618003.2 mRNA upstream 83585 28731803 ~ 28815504 (-) True LOC110533612
XM_021618006.2 mRNA upstream 260173 28908391 ~ 29011524 (-) False LOC110533613
XM_021618007.2 mRNA upstream 260173 28908391 ~ 29166800 (-) True LOC110533613
XM_021618012.2 mRNA upstream 877747 29525965 ~ 29530354 (-) False cnot8
TU995737 other downstream 100302 28540229 ~ 28543267 (-) True G874706
TU994733 other downstream 1059307 27582929 ~ 27584262 (-) True G873784
TU994221 other downstream 1290323 27352393 ~ 27353246 (-) True LOC110533580
TU994124 other downstream 1479019 27162900 ~ 27164550 (-) False G873209
TU993956 other downstream 1736617 26890025 ~ 26906952 (-) True LOC110533569
TU996256 other upstream 293022 28941240 ~ 28985070 (-) True G875194
TU998135 other upstream 1267149 29915367 ~ 29916505 (-) True LOC110533621
TU1000307 other upstream 2799264 31447482 ~ 31449163 (-) True G878962
TU1000802 other upstream 3577214 32225432 ~ 32225936 (-) True G879440
TU1000800 other upstream 3598793 32247011 ~ 32249213 (-) True LOC110533652

Expression Profile


XM_036990022.1 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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XM_036990022.1 Expression in each Bioproject

Bar chart with 21 bars.
XM_036990022.1 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.