Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001160598.1 |
| length | 889 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | med31 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34380235 ~ 34387056 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| K15153 | MED31, SOH1; mediator of RNA polymerase II transcription subunit 31 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1003029 | lncRNA | upstream | 14314 | 34364713 ~ 34365944 (+) | True | G881498 |
| TU1003030 | lncRNA | upstream | 16260 | 34363766 ~ 34363998 (+) | True | G881499 |
| TU1003018 | lncRNA | upstream | 46792 | 34333060 ~ 34333466 (+) | True | G881488 |
| TU1003016 | lncRNA | upstream | 48209 | 34331730 ~ 34332049 (+) | True | G881486 |
| TU1003010 | lncRNA | upstream | 51980 | 34322946 ~ 34328278 (+) | True | G881480 |
| TU1003036 | lncRNA | downstream | 6974 | 34394019 ~ 34396839 (+) | True | LOC110533701 |
| TU1003037 | lncRNA | downstream | 10480 | 34397525 ~ 34397781 (+) | True | G881504 |
| TU1003040 | lncRNA | downstream | 12015 | 34399060 ~ 34399356 (+) | True | G881507 |
| TU1003067 | lncRNA | downstream | 107510 | 34494555 ~ 34562820 (+) | True | G881531 |
| TU1003144 | lncRNA | downstream | 211082 | 34598127 ~ 34598341 (+) | True | G881606 |
| XM_021618153.2 | mRNA | upstream | 2318 | 34366052 ~ 34377940 (+) | False | LOC110533696 |
| XM_021618155.2 | mRNA | upstream | 3047 | 34366053 ~ 34377211 (+) | False | LOC110533696 |
| XM_021618154.2 | mRNA | upstream | 3047 | 34366054 ~ 34377211 (+) | False | LOC110533696 |
| XM_036990104.1 | mRNA | upstream | 3047 | 34367668 ~ 34377211 (+) | True | LOC110533696 |
| XM_021618150.2 | mRNA | upstream | 57726 | 34299429 ~ 34322532 (+) | False | LOC110533694 |
| XM_021618162.2 | mRNA | downstream | 697 | 34387742 ~ 34391447 (+) | False | LOC110533700 |
| XM_021618161.2 | mRNA | downstream | 1197 | 34388242 ~ 34391447 (+) | False | LOC110533700 |
| XM_021618160.2 | mRNA | downstream | 1198 | 34388243 ~ 34391447 (+) | True | LOC110533700 |
| XM_036990105.1 | mRNA | downstream | 4665 | 34391710 ~ 34397234 (+) | False | LOC110533701 |
| XM_021618163.2 | mRNA | downstream | 4671 | 34391716 ~ 34397234 (+) | False | LOC110533701 |
| TU1001973 | other | upstream | 332534 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
| TU1001972 | other | upstream | 332580 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001481 | other | upstream | 1078520 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001378 | other | upstream | 1245344 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001241 | other | upstream | 1334759 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU1003053 | other | downstream | 47497 | 34434542 ~ 34435418 (+) | True | hsd20b2 |
| TU1003066 | other | downstream | 50295 | 34437340 ~ 34443357 (+) | True | LOC110533705 |
| TU1003062 | other | downstream | 71749 | 34458794 ~ 34470378 (+) | True | rnasekb |
| TU1003061 | other | downstream | 99775 | 34486820 ~ 34488714 (+) | True | LOC110534915 |
| TU1003072 | other | downstream | 102775 | 34489820 ~ 34494101 (+) | True | G881536 |
