RNA id: XR_005034473.1



Basic Information


Item Value
RNA id XR_005034473.1
length 79
RNA type mRNA
GC content 0.51
exon number 1
gene id LOC118937077
representative True

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35533326 ~ 35533404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCCACAGGATGACCTCATAGATATGCATTAGCGCTCTGCGCAGAGATGACCCACTATCTATCACCCAAGTCTGATGGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1004594 lncRNA downstream 103392 35429734 ~ 35429934 (-) True G882875
TU1004311 lncRNA downstream 104616 35428413 ~ 35428710 (-) True G882632
TU1004307 lncRNA downstream 109501 35423597 ~ 35423825 (-) True G882628
TU1004302 lncRNA downstream 118778 35414243 ~ 35414548 (-) True G882623
TU1004284 lncRNA downstream 126904 35381423 ~ 35406422 (-) True G882605
TU1004693 lncRNA upstream 26094 35559498 ~ 35562576 (-) False G882951
TU1004695 lncRNA upstream 28061 35561465 ~ 35562576 (-) True G882951
TU1004781 lncRNA upstream 157114 35690518 ~ 35743100 (-) True G883030
TU1004880 lncRNA upstream 338111 35871515 ~ 35871734 (-) True G883112
TU1004883 lncRNA upstream 339061 35872465 ~ 35872720 (-) True G883115
LOC118937084 mRNA downstream 4435 35528774 ~ 35528891 (-) True LOC118937084
XM_036990147.1 mRNA downstream 16080 35506864 ~ 35517246 (-) False LOC110533740
XM_021618234.2 mRNA upstream 46371 35579775 ~ 35584629 (-) True LOC110533743
XM_021618235.2 mRNA upstream 74806 35608210 ~ 35613400 (-) True LOC110533744
XM_021618254.2 mRNA upstream 171444 35704848 ~ 35716516 (-) True LOC110533752
XM_021618242.2 mRNA upstream 183351 35716755 ~ 35776627 (-) False LOC110533749
XM_021618243.2 mRNA upstream 183351 35716755 ~ 35776627 (-) False LOC110533749
TU1004310 other downstream 105118 35427249 ~ 35428208 (-) True G882631
TU1004213 other downstream 211620 35320814 ~ 35321706 (-) True G882539
TU1004252 other downstream 229271 35302914 ~ 35304055 (-) True G882578
TU1003687 other downstream 639398 34892979 ~ 34893928 (-) True LOC110533718
TU1003456 other downstream 934651 34598367 ~ 34598675 (-) True LOC110534894
TU1004715 other upstream 64913 35598317 ~ 35599085 (-) True G882971
TU1004896 other upstream 347120 35880524 ~ 35880951 (-) True G883128
TU1005623 other upstream 856593 36389997 ~ 36390914 (-) True G883753
TU1005624 other upstream 857699 36391103 ~ 36392527 (-) True G883754
TU1006338 other upstream 1126114 36659518 ~ 36665357 (-) True scn4bb

Expression Profile