Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001124693.2 |
| length | 1118 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | epd |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36293313 ~ 36295517 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1005263 | lncRNA | downstream | 110273 | 36181976 ~ 36183040 (-) | True | G883440 |
| TU1005257 | lncRNA | downstream | 119864 | 36173028 ~ 36173449 (-) | True | G883434 |
| TU1004883 | lncRNA | downstream | 420593 | 35872465 ~ 35872720 (-) | True | G883115 |
| TU1004880 | lncRNA | downstream | 421579 | 35871515 ~ 35871734 (-) | True | G883112 |
| TU1004781 | lncRNA | downstream | 550213 | 35690518 ~ 35743100 (-) | True | G883030 |
| TU1005598 | lncRNA | upstream | 43015 | 36338532 ~ 36338783 (-) | True | G883733 |
| TU1005601 | lncRNA | upstream | 48307 | 36343824 ~ 36344118 (-) | True | G883736 |
| TU1005602 | lncRNA | upstream | 48708 | 36344225 ~ 36344469 (-) | True | G883737 |
| TU1005603 | lncRNA | upstream | 49042 | 36344559 ~ 36344786 (-) | True | G883738 |
| TU1005607 | lncRNA | upstream | 54621 | 36350138 ~ 36350433 (-) | True | G883741 |
| XM_036990178.1 | mRNA | downstream | 3592 | 36277054 ~ 36289721 (-) | True | LOC110533772 |
| XM_021618270.2 | mRNA | downstream | 175553 | 36104781 ~ 36117760 (-) | False | ercc6l |
| XM_036990169.1 | mRNA | downstream | 175553 | 36104781 ~ 36117760 (-) | True | ercc6l |
| XM_036990167.1 | mRNA | downstream | 190665 | 36086295 ~ 36102648 (-) | True | LOC110533762 |
| XM_036990166.1 | mRNA | downstream | 190676 | 36086295 ~ 36102637 (-) | False | LOC110533762 |
| XM_036990182.1 | mRNA | upstream | 8216 | 36303733 ~ 36319614 (-) | False | LOC110533773 |
| XM_036990180.1 | mRNA | upstream | 8216 | 36303733 ~ 36326711 (-) | False | LOC110533773 |
| XM_036990181.1 | mRNA | upstream | 8216 | 36303733 ~ 36341818 (-) | False | LOC110533773 |
| XM_036990179.1 | mRNA | upstream | 8216 | 36303733 ~ 36341819 (-) | True | LOC110533773 |
| XM_036990184.1 | mRNA | upstream | 103423 | 36398940 ~ 36592948 (-) | False | LOC110533100 |
| TU1004896 | other | downstream | 412362 | 35880524 ~ 35880951 (-) | True | G883128 |
| TU1004715 | other | downstream | 694228 | 35598317 ~ 35599085 (-) | True | G882971 |
| TU1004310 | other | downstream | 865105 | 35427249 ~ 35428208 (-) | True | G882631 |
| TU1004213 | other | downstream | 971607 | 35320814 ~ 35321706 (-) | True | G882539 |
| TU1004252 | other | downstream | 989258 | 35302914 ~ 35304055 (-) | True | G882578 |
| TU1005623 | other | upstream | 94480 | 36389997 ~ 36390914 (-) | True | G883753 |
| TU1005624 | other | upstream | 95586 | 36391103 ~ 36392527 (-) | True | G883754 |
| TU1006338 | other | upstream | 364001 | 36659518 ~ 36665357 (-) | True | scn4bb |
| TU1006746 | other | upstream | 1021400 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1007025 | other | upstream | 1303116 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
