Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1005768 |
| length | 304 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 1 |
| gene id | LOC110533102 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36702718 ~ 36704449 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1005757 | lncRNA | upstream | 37033 | 36666638 ~ 36666901 (+) | True | G883877 |
| TU1005744 | lncRNA | upstream | 49013 | 36654696 ~ 36654921 (+) | True | G883864 |
| TU1005739 | lncRNA | upstream | 62727 | 36640992 ~ 36641207 (+) | True | G883859 |
| TU1005738 | lncRNA | upstream | 65247 | 36638479 ~ 36638687 (+) | True | G883858 |
| TU1005726 | lncRNA | upstream | 83737 | 36618880 ~ 36620197 (+) | True | G883847 |
| TU1005801 | lncRNA | downstream | 26345 | 36730582 ~ 36730810 (+) | True | G883906 |
| TU1005770 | lncRNA | downstream | 29351 | 36733588 ~ 36735317 (+) | False | G883889 |
| TU1005772 | lncRNA | downstream | 29351 | 36733588 ~ 36734975 (+) | False | G883889 |
| TU1005773 | lncRNA | downstream | 30766 | 36735003 ~ 36746662 (+) | True | G883889 |
| TU1005810 | lncRNA | downstream | 46127 | 36750364 ~ 36750630 (+) | True | G883914 |
| XM_021618293.2 | mRNA | upstream | 5232 | 36683866 ~ 36698702 (+) | False | LOC110533779 |
| XM_036990190.1 | mRNA | upstream | 5232 | 36683866 ~ 36698702 (+) | True | LOC110533779 |
| XM_021618291.2 | mRNA | upstream | 53628 | 36645720 ~ 36650306 (+) | True | tmprss4b |
| XM_036990183.1 | mRNA | upstream | 326795 | 36350070 ~ 36377139 (+) | False | LOC110533776 |
| XM_021618287.2 | mRNA | upstream | 326795 | 36350071 ~ 36377139 (+) | False | LOC110533776 |
| XR_005053648.1 | mRNA | downstream | 7714 | 36711951 ~ 36713863 (+) | True | LOC110533781 |
| XM_021618298.2 | mRNA | downstream | 84223 | 36788460 ~ 36793079 (+) | True | LOC110533785 |
| XR_002475041.2 | mRNA | downstream | 95139 | 36799376 ~ 36801589 (+) | False | LOC110533788 |
| XM_021618306.2 | mRNA | downstream | 172438 | 36876675 ~ 36878956 (+) | True | mrpl48 |
| XM_021618316.2 | mRNA | downstream | 228012 | 36932249 ~ 36955772 (+) | True | LOC110533794 |
| TU1005301 | other | upstream | 408387 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 1017361 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1004303 | other | upstream | 1287696 | 35414975 ~ 35416238 (+) | True | G882624 |
| TU1003912 | other | upstream | 1382133 | 35318500 ~ 35321801 (+) | False | mogat3b |
| TU1005835 | other | downstream | 95148 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005877 | other | downstream | 145409 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1008492 | other | downstream | 2051272 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1012334 | other | downstream | 5008090 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 5008090 | 41712327 ~ 41717292 (+) | False | G889906 |
