Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1007412 |
| length | 1222 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 1 |
| gene id | LOC110533830 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 37973339 ~ 37992661 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1007406 | lncRNA | upstream | 24911 | 37966326 ~ 37966529 (+) | True | G885356 |
| TU1007361 | lncRNA | upstream | 32369 | 37936993 ~ 37959071 (+) | True | G885318 |
| TU1007363 | lncRNA | upstream | 50236 | 37885017 ~ 37941204 (+) | True | G885320 |
| TU1007313 | lncRNA | upstream | 170386 | 37820772 ~ 37821054 (+) | True | G885273 |
| TU1007309 | lncRNA | upstream | 176611 | 37814630 ~ 37814829 (+) | True | G885269 |
| TU1007429 | lncRNA | downstream | 7695 | 38000356 ~ 38000583 (+) | True | G885379 |
| TU1007432 | lncRNA | downstream | 9052 | 38001713 ~ 38055687 (+) | True | G885381 |
| TU1007465 | lncRNA | downstream | 54718 | 38047379 ~ 38048064 (+) | True | G885413 |
| TU1007471 | lncRNA | downstream | 65086 | 38057747 ~ 38058025 (+) | True | G885419 |
| TU1007662 | lncRNA | downstream | 124499 | 38117160 ~ 38117985 (+) | True | LOC110533835 |
| XM_021618359.2 | mRNA | upstream | 95065 | 37876928 ~ 37896375 (+) | False | LOC110533825 |
| XM_021618358.2 | mRNA | upstream | 95065 | 37876934 ~ 37896375 (+) | True | LOC110533825 |
| XR_005053659.1 | mRNA | upstream | 280757 | 37704049 ~ 37710683 (+) | False | LOC118966772 |
| XR_005053657.1 | mRNA | upstream | 472931 | 37510479 ~ 37518509 (+) | True | agtr2 |
| XM_036990213.1 | mRNA | upstream | 474324 | 37497022 ~ 37517116 (+) | False | agtr2 |
| XM_021618371.2 | mRNA | downstream | 9938 | 38002599 ~ 38039709 (+) | False | msna |
| XM_021618372.2 | mRNA | downstream | 23958 | 38016619 ~ 38039709 (+) | True | msna |
| XM_036990217.1 | mRNA | downstream | 67101 | 38059762 ~ 38063313 (+) | True | LOC110533834 |
| XR_005053660.1 | mRNA | downstream | 124493 | 38117154 ~ 38117987 (+) | False | LOC110533835 |
| XM_021617169.2 | mRNA | downstream | 186043 | 38178704 ~ 38230238 (+) | False | ar-beta |
| TU1005877 | other | upstream | 1140287 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1005835 | other | upstream | 1189855 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005301 | other | upstream | 1695893 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 2304867 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1004303 | other | upstream | 2575202 | 35414975 ~ 35416238 (+) | True | G882624 |
| TU1008492 | other | downstream | 762848 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1012334 | other | downstream | 3719666 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 3719666 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012336 | other | downstream | 3719666 | 41712327 ~ 41717292 (+) | True | G889906 |
| TU1012699 | other | downstream | 4085554 | 42078215 ~ 42153778 (+) | False | G890228 |
