Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003764 |
| length | 966 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | XLOC_001910 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 8527196 ~ 8530065 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-081104-158 | Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in cerebral amyloid angiopathy; coronary artery disease; and myocardial infarction. Orthologous to several human genes including CLEC12B (C-type lectin domain family 12 member B). |
| ensembl_id | ENSDART00000141147 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003761 | lncRNA | upstream | 118321 | 8402096 ~ 8408875 (+) | True | XLOC_001907 |
| TCONS_00003758 | lncRNA | upstream | 263872 | 8252143 ~ 8263324 (+) | True | XLOC_001905 |
| TCONS_00005827 | lncRNA | upstream | 489307 | 8036184 ~ 8037889 (+) | True | XLOC_001902 |
| TCONS_00005679 | lncRNA | upstream | 534737 | 7988025 ~ 7992459 (+) | True | XLOC_001901 |
| TCONS_00005826 | lncRNA | upstream | 542614 | 7978517 ~ 7984582 (+) | True | XLOC_001900 |
| TCONS_00005680 | lncRNA | downstream | 116894 | 8646959 ~ 8650855 (+) | True | XLOC_001913 |
| TCONS_00005828 | lncRNA | downstream | 179420 | 8709485 ~ 8715748 (+) | True | XLOC_001917 |
| TCONS_00005681 | lncRNA | downstream | 243371 | 8773436 ~ 8773659 (+) | True | XLOC_001919 |
| TCONS_00005829 | lncRNA | downstream | 592328 | 9122393 ~ 9125863 (+) | True | XLOC_001926 |
| TCONS_00005830 | lncRNA | downstream | 1116438 | 9646503 ~ 9661896 (+) | False | XLOC_001935 |
| TCONS_00003763 | mRNA | upstream | 43195 | 8481660 ~ 8484001 (+) | True | XLOC_001909 |
| TCONS_00003762 | mRNA | upstream | 58247 | 8437930 ~ 8468949 (+) | True | XLOC_001908 |
| TCONS_00003760 | mRNA | upstream | 114232 | 8401929 ~ 8412964 (+) | False | XLOC_001907 |
| TCONS_00003757 | mRNA | upstream | 261102 | 8197827 ~ 8266094 (+) | False | XLOC_001905 |
| TCONS_00003756 | mRNA | upstream | 384983 | 8101763 ~ 8142213 (+) | True | XLOC_001904 |
| TCONS_00003765 | mRNA | downstream | 4685 | 8534750 ~ 8576218 (+) | False | XLOC_001911 |
| TCONS_00003766 | mRNA | downstream | 7760 | 8537825 ~ 8576218 (+) | False | XLOC_001911 |
| TCONS_00003767 | mRNA | downstream | 20370 | 8550435 ~ 8576218 (+) | False | XLOC_001911 |
| TCONS_00003768 | mRNA | downstream | 21832 | 8551897 ~ 8576218 (+) | False | XLOC_001911 |
| TCONS_00003769 | mRNA | downstream | 24864 | 8554929 ~ 8573153 (+) | True | XLOC_001911 |
| TCONS_00003759 | other | upstream | 183891 | 8343188 ~ 8343305 (+) | True | XLOC_001906 |
| TCONS_00003739 | other | upstream | 949145 | 7573316 ~ 7578051 (+) | True | XLOC_001890 |
| TCONS_00003731 | other | upstream | 1317088 | 7083771 ~ 7210108 (+) | False | XLOC_001887 |
| TCONS_00003693 | other | upstream | 2757584 | 5744923 ~ 5769612 (+) | False | XLOC_001866 |
| TCONS_00003679 | other | upstream | 3374795 | 5151349 ~ 5152401 (+) | True | XLOC_001855 |
| TCONS_00003778 | other | downstream | 332456 | 8862521 ~ 8868895 (+) | True | XLOC_001921 |
| TCONS_00003779 | other | downstream | 339403 | 8869468 ~ 8880126 (+) | False | XLOC_001922 |
| TCONS_00003791 | other | downstream | 816331 | 9346396 ~ 9348506 (+) | False | XLOC_001931 |
| TCONS_00003802 | other | downstream | 1195709 | 9725774 ~ 9725891 (+) | True | XLOC_001937 |
| TCONS_00003803 | other | downstream | 1382998 | 9913063 ~ 9913177 (+) | True | XLOC_001940 |
