Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1057595 |
| length | 466 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC110514629 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 81721230 ~ 81745845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0048821 | erythrocyte development | biological_process |
| GO:0043065 | positive regulation of apoptotic process | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0008016 | regulation of heart contraction | biological_process |
| GO:0046777 | protein autophosphorylation | biological_process |
| GO:0061351 | neural precursor cell proliferation | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005938 | cell cortex | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0008289 | lipid binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| GO:0004715 | non-membrane spanning protein tyrosine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1057610 | lncRNA | upstream | 2424 | 81727468 ~ 81727673 (+) | True | G928948 |
| TU1057609 | lncRNA | upstream | 27271 | 81702543 ~ 81702826 (+) | True | G928947 |
| TU1057591 | lncRNA | upstream | 50458 | 81679392 ~ 81679639 (+) | True | G928932 |
| TU1057570 | lncRNA | upstream | 51664 | 81677828 ~ 81678433 (+) | True | G928913 |
| TU1057572 | lncRNA | upstream | 73589 | 81655932 ~ 81656508 (+) | True | LOC118936819 |
| TU1057612 | lncRNA | downstream | 2265 | 81733943 ~ 81734340 (+) | True | G928950 |
| TU1057616 | lncRNA | downstream | 15361 | 81747039 ~ 81747672 (+) | True | G928954 |
| TU1057623 | lncRNA | downstream | 24750 | 81756428 ~ 81768165 (+) | False | G928957 |
| TU1057624 | lncRNA | downstream | 24750 | 81756428 ~ 81764254 (+) | False | G928957 |
| TU1057628 | lncRNA | downstream | 24750 | 81756428 ~ 81768547 (+) | False | G928957 |
| XR_005034267.1 | mRNA | upstream | 44658 | 81682437 ~ 81685439 (+) | False | LOC118936820 |
| XM_036934202.1 | mRNA | downstream | 18544 | 81750222 ~ 81754997 (+) | False | LOC110515659 |
| XM_036934201.1 | mRNA | downstream | 18928 | 81750606 ~ 81754997 (+) | True | LOC110515659 |
| XR_005034276.1 | mRNA | downstream | 197467 | 81929145 ~ 81942287 (+) | True | LOC118936822 |
| XR_005034365.1 | mRNA | downstream | 232406 | 81964084 ~ 81964825 (+) | False | LOC118936939 |
| XM_036934203.1 | mRNA | downstream | 249116 | 81980794 ~ 81986434 (+) | True | LOC118936823 |
| TU1057598 | other | upstream | 7256 | 81721233 ~ 81722841 (+) | False | LOC110514629 |
| TU1057571 | other | upstream | 73589 | 81635738 ~ 81656508 (+) | False | LOC118936819 |
| TU1057588 | other | upstream | 75706 | 81653391 ~ 81654391 (+) | True | G928929 |
| TU1057587 | other | upstream | 75820 | 81653391 ~ 81654277 (+) | False | G928929 |
| TU1057517 | other | upstream | 134360 | 81595003 ~ 81595737 (+) | True | LOC118936818 |
| TU1057735 | other | downstream | 216432 | 81948110 ~ 81961513 (+) | True | G929033 |
| TU1057775 | other | downstream | 441787 | 82173465 ~ 82201005 (+) | False | LOC118936825 |
| TU1057776 | other | downstream | 441787 | 82173465 ~ 82201005 (+) | False | LOC118936825 |
| TU1057850 | other | downstream | 448108 | 82179786 ~ 82180426 (+) | True | G929113 |
| TU1057777 | other | downstream | 465028 | 82196706 ~ 82201005 (+) | False | LOC118936825 |
