Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU964474 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G846625 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 3340227 ~ 3340454 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU964469 | lncRNA | downstream | 19033 | 3320963 ~ 3321194 (-) | True | G846621 |
| TU964462 | lncRNA | downstream | 28619 | 3311403 ~ 3311608 (-) | True | G846614 |
| TU964443 | lncRNA | downstream | 70932 | 3267749 ~ 3269295 (-) | False | G846600 |
| TU964398 | lncRNA | downstream | 76689 | 3263189 ~ 3263538 (-) | True | G846567 |
| TU964365 | lncRNA | downstream | 176676 | 3163314 ~ 3163551 (-) | True | G846547 |
| TU964858 | lncRNA | upstream | 3384 | 3343838 ~ 3432780 (-) | True | G846931 |
| TU964899 | lncRNA | upstream | 78172 | 3418626 ~ 3419052 (-) | False | LOC110492805 |
| TU964900 | lncRNA | upstream | 78172 | 3418626 ~ 3419052 (-) | True | LOC110492805 |
| TU964912 | lncRNA | upstream | 104063 | 3444517 ~ 3444744 (-) | True | G846970 |
| TU964915 | lncRNA | upstream | 107650 | 3448104 ~ 3448303 (-) | True | G846973 |
| XM_036989490.1 | mRNA | downstream | 32395 | 3280688 ~ 3307832 (-) | False | smyd4 |
| XM_036989491.1 | mRNA | downstream | 32395 | 3280688 ~ 3307832 (-) | False | smyd4 |
| XM_021617354.2 | mRNA | downstream | 149342 | 3188962 ~ 3190885 (-) | True | LOC110533270 |
| XM_021617353.2 | mRNA | downstream | 186952 | 3151322 ~ 3153275 (-) | False | LOC110533269 |
| XR_005053547.1 | mRNA | downstream | 186971 | 3151322 ~ 3153256 (-) | False | LOC110533269 |
| XM_036989492.1 | mRNA | upstream | 78010 | 3418464 ~ 3577074 (-) | False | LOC110492805 |
| XR_005053548.1 | mRNA | upstream | 100268 | 3440722 ~ 3577074 (-) | False | LOC110492805 |
| XM_036989493.1 | mRNA | upstream | 292943 | 3633397 ~ 3676854 (-) | True | LOC110491256 |
| XM_021564603.2 | mRNA | upstream | 576192 | 3916646 ~ 3923466 (-) | True | LOC110491262 |
| XM_036989506.1 | mRNA | upstream | 589744 | 3930198 ~ 3959902 (-) | False | LOC110492807 |
| TU964445 | other | downstream | 39739 | 3267749 ~ 3300488 (-) | True | G846600 |
| TU964450 | other | downstream | 58354 | 3280610 ~ 3281873 (-) | True | smyd4 |
| TU964312 | other | downstream | 187004 | 3151390 ~ 3153223 (-) | False | LOC110533269 |
| TU964313 | other | downstream | 187004 | 3151390 ~ 3153223 (-) | True | LOC110533269 |
| TU964319 | other | downstream | 262720 | 3072634 ~ 3077507 (-) | True | LOC110534827 |
| TU965880 | other | upstream | 1076152 | 4416606 ~ 4419950 (-) | False | G847740 |
| TU965963 | other | upstream | 1227358 | 4567812 ~ 4569190 (-) | False | G847774 |
| TU965964 | other | upstream | 1227358 | 4567812 ~ 4569190 (-) | True | G847774 |
| TU966039 | other | upstream | 1396075 | 4736529 ~ 4741588 (-) | False | G847843 |
| TU966040 | other | upstream | 1396075 | 4736529 ~ 4741588 (-) | False | G847843 |
