RNA id: TU966062



Basic Information


Item Value
RNA id TU966062
length 395
RNA type TUCP
GC content 0.38
exon number 2
gene id G847861
representative True

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 4810948 ~ 4812182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GACATGTTCTACCTTCAAATTAAACCCACAGACATGTTCTACCTTCAGattaaacacacagacatgttTTACCTTCAGATTAAACCCACAGACATGTTCTACCTTCAGATTAAACTCACAGACATGTTTTACCTTCAGATTAAACCCACAGACATGTTCTACCTTCGGATTAAACCCACAGACATGTTCTACCTTCAGATTAAACTCACAGACAAGTTCTACCTTCAGATTAAACCCACAGACATGTTCTACCTTCAGATTAAACCCACAGACATGTTTTACCTTCAGATTAAACCCACAGACATGTTCTACCTTCGGATTAAACCCACAGACATGTTCTACCTTCAGATTAAACTCACAGACATGTTTTACCTTCAGATTAAACCCACAGACAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU966052 lncRNA downstream 21879 4787898 ~ 4789069 (-) True G847853
TU966043 lncRNA downstream 64255 4746429 ~ 4746693 (-) True G847844
TU965970 lncRNA downstream 198707 4530166 ~ 4612241 (-) True G847779
TU965999 lncRNA downstream 224819 4582723 ~ 4586129 (-) True G847806
TU965997 lncRNA downstream 233805 4575657 ~ 4577143 (-) True G847804
TU966065 lncRNA upstream 2712 4814894 ~ 4815198 (-) True G847864
TU966069 lncRNA upstream 10377 4822559 ~ 4822809 (-) True G847868
TU966075 lncRNA upstream 19942 4832124 ~ 4832324 (-) True G847874
TU966078 lncRNA upstream 25583 4837765 ~ 4838003 (-) True G847877
TU966080 lncRNA upstream 29117 4841299 ~ 4841586 (-) True G847879
XM_021617332.2 mRNA downstream 446990 4309807 ~ 4363958 (-) True alg9
XM_036989512.1 mRNA downstream 509264 4286085 ~ 4301684 (-) False c10h11orf1
XM_036989515.1 mRNA downstream 509264 4286085 ~ 4301684 (-) True c10h11orf1
XM_036989514.1 mRNA downstream 509265 4286085 ~ 4301683 (-) False c10h11orf1
XM_036989513.1 mRNA downstream 509266 4286085 ~ 4301682 (-) False c10h11orf1
XM_036989527.1 mRNA upstream 192764 5004946 ~ 5052396 (-) True kl
XM_036934549.1 mRNA upstream 332322 5144504 ~ 5280794 (-) True LOC110533265
XM_036989529.1 mRNA upstream 646549 5458731 ~ 5479247 (-) True LOC110533267
XM_036989530.1 mRNA upstream 670013 5482195 ~ 5499373 (-) False LOC110534826
XM_036989531.1 mRNA upstream 670013 5482195 ~ 5499373 (-) False LOC110534826
TU966039 other downstream 69360 4736529 ~ 4741588 (-) False G847843
TU966040 other downstream 69360 4736529 ~ 4741588 (-) False G847843
TU966041 other downstream 69360 4736529 ~ 4741588 (-) False G847843
TU966042 other downstream 69360 4736529 ~ 4741588 (-) True G847843
TU965963 other downstream 241758 4567812 ~ 4569190 (-) False G847774
TU966396 other upstream 329695 5141877 ~ 5142471 (-) True G848149
TU966871 other upstream 907465 5719647 ~ 5724810 (-) True LOC118966693
TU966880 other upstream 927702 5739884 ~ 5822028 (-) True G848524
TU967954 other upstream 1969441 6781623 ~ 6787520 (-) False G849438
TU968094 other upstream 2202549 7014731 ~ 7015222 (-) True G849536

Expression Profile