Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU972539 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G853265 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 11032169 ~ 11032394 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
11,029,600
11,030,000
11,030,400
11,030,800
11,031,200
11,031,600
11,032,000
11,032,400
11,032,800
11,033,200
11,033,600
11,034,000
NC_048574.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU972534 | lncRNA | downstream | 5823 | 11026088 ~ 11026346 (-) | True | bod1 |
| TU972524 | lncRNA | downstream | 15695 | 11016184 ~ 11016474 (-) | True | G853252 |
| TU972515 | lncRNA | downstream | 27142 | 11004742 ~ 11005027 (-) | True | G853243 |
| TU972510 | lncRNA | downstream | 31185 | 11000616 ~ 11000984 (-) | True | G853238 |
| TU972509 | lncRNA | downstream | 34490 | 10997299 ~ 10997679 (-) | True | G853237 |
| TU972545 | lncRNA | upstream | 3938 | 11036332 ~ 11036622 (-) | True | G853271 |
| TU972550 | lncRNA | upstream | 8796 | 11041190 ~ 11041391 (-) | True | G853276 |
| TU972557 | lncRNA | upstream | 11826 | 11044220 ~ 11044453 (-) | True | G853283 |
| TU972563 | lncRNA | upstream | 24847 | 11057241 ~ 11057502 (-) | True | G853289 |
| TU972675 | lncRNA | upstream | 102425 | 11134819 ~ 11139800 (-) | False | G853390 |
| XM_021617449.2 | mRNA | downstream | 2658 | 11026087 ~ 11029511 (-) | False | bod1 |
| XM_036989695.1 | mRNA | downstream | 2658 | 11026087 ~ 11029511 (-) | False | bod1 |
| XM_021617448.2 | mRNA | downstream | 38376 | 10988789 ~ 10993793 (-) | True | LOC110533336 |
| XM_021617439.2 | mRNA | downstream | 182336 | 10760682 ~ 10849833 (-) | True | LOC110533330 |
| XR_005053571.1 | mRNA | downstream | 323093 | 10707542 ~ 10709076 (-) | False | LOC118966706 |
| XR_005034347.1 | mRNA | upstream | 57627 | 11090021 ~ 11091274 (-) | True | LOC118936915 |
| XM_021617454.2 | mRNA | upstream | 434987 | 11467381 ~ 11474701 (-) | True | LOC110533343 |
| XM_021617455.2 | mRNA | upstream | 529542 | 11561936 ~ 11564213 (-) | True | LOC110533344 |
| XM_021617456.2 | mRNA | upstream | 535099 | 11567493 ~ 11583280 (-) | False | LOC110533345 |
| XM_021617457.2 | mRNA | upstream | 535099 | 11567493 ~ 11583280 (-) | False | LOC110533345 |
| TU972516 | other | downstream | 26511 | 11005109 ~ 11005658 (-) | True | G853244 |
| TU971979 | other | downstream | 569519 | 10462256 ~ 10462650 (-) | True | G852802 |
| TU969585 | other | downstream | 2600128 | 8431531 ~ 8432041 (-) | True | G850763 |
| TU969056 | other | downstream | 3285545 | 7741302 ~ 7746624 (-) | True | G850323 |
| TU968514 | other | downstream | 3588552 | 7440903 ~ 7443617 (-) | True | G849864 |
| TU973046 | other | upstream | 409858 | 11442252 ~ 11442590 (-) | True | G853740 |
| TU973334 | other | upstream | 549292 | 11581686 ~ 11583188 (-) | True | LOC110533345 |
| TU973362 | other | upstream | 582862 | 11615256 ~ 11620922 (-) | True | G854016 |
| TU973775 | other | upstream | 752726 | 11785120 ~ 11785853 (-) | True | G854402 |
| TU974134 | other | upstream | 1261709 | 12294103 ~ 12294536 (-) | True | G854734 |
