Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003795 |
| length | 1407 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 9 |
| gene id | XLOC_001934 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 9550419 ~ 9571012 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005882 | intermediate filament | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-2830 | Predicted to enable structural molecule activity. Predicted to be located in intermediate filament. |
| ensembl_id | ENSDART00000064977 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005829 | lncRNA | upstream | 424556 | 9122393 ~ 9125863 (+) | True | XLOC_001926 |
| TCONS_00005681 | lncRNA | upstream | 776760 | 8773436 ~ 8773659 (+) | True | XLOC_001919 |
| TCONS_00005828 | lncRNA | upstream | 834671 | 8709485 ~ 8715748 (+) | True | XLOC_001917 |
| TCONS_00005680 | lncRNA | upstream | 899564 | 8646959 ~ 8650855 (+) | True | XLOC_001913 |
| TCONS_00003761 | lncRNA | upstream | 1141544 | 8402096 ~ 8408875 (+) | True | XLOC_001907 |
| TCONS_00005830 | lncRNA | downstream | 75796 | 9646503 ~ 9661896 (+) | False | XLOC_001935 |
| TCONS_00005682 | lncRNA | downstream | 78665 | 9649372 ~ 9661381 (+) | False | XLOC_001935 |
| TCONS_00005683 | lncRNA | downstream | 78897 | 9649604 ~ 9661896 (+) | False | XLOC_001935 |
| TCONS_00005684 | lncRNA | downstream | 78942 | 9649649 ~ 9661896 (+) | True | XLOC_001935 |
| TCONS_00005831 | lncRNA | downstream | 252490 | 9823197 ~ 9835446 (+) | True | XLOC_001938 |
| TCONS_00003794 | mRNA | upstream | 130425 | 9410304 ~ 9419994 (+) | True | XLOC_001933 |
| TCONS_00003793 | mRNA | upstream | 155199 | 9372702 ~ 9395220 (+) | True | XLOC_001932 |
| TCONS_00003790 | mRNA | upstream | 179475 | 9346383 ~ 9370944 (+) | False | XLOC_001931 |
| TCONS_00003792 | mRNA | upstream | 180675 | 9346450 ~ 9369744 (+) | True | XLOC_001931 |
| TCONS_00003789 | mRNA | upstream | 265245 | 9281991 ~ 9285174 (+) | True | XLOC_001930 |
| TCONS_00003798 | mRNA | downstream | 24868 | 9595575 ~ 9649735 (+) | False | XLOC_001935 |
| TCONS_00003799 | mRNA | downstream | 24868 | 9595575 ~ 9655820 (+) | False | XLOC_001935 |
| TCONS_00003800 | mRNA | downstream | 30880 | 9601587 ~ 9644719 (+) | False | XLOC_001935 |
| TCONS_00003801 | mRNA | downstream | 126390 | 9697097 ~ 9810597 (+) | True | XLOC_001936 |
| TCONS_00003805 | mRNA | downstream | 639748 | 10210455 ~ 10274162 (+) | True | XLOC_001942 |
| TCONS_00003791 | other | upstream | 201913 | 9346396 ~ 9348506 (+) | False | XLOC_001931 |
| TCONS_00003779 | other | upstream | 670293 | 8869468 ~ 8880126 (+) | False | XLOC_001922 |
| TCONS_00003778 | other | upstream | 681524 | 8862521 ~ 8868895 (+) | True | XLOC_001921 |
| TCONS_00003759 | other | upstream | 1207114 | 8343188 ~ 8343305 (+) | True | XLOC_001906 |
| TCONS_00003739 | other | upstream | 1972368 | 7573316 ~ 7578051 (+) | True | XLOC_001890 |
| TCONS_00003802 | other | downstream | 155067 | 9725774 ~ 9725891 (+) | True | XLOC_001937 |
| TCONS_00003803 | other | downstream | 342356 | 9913063 ~ 9913177 (+) | True | XLOC_001940 |
| TCONS_00003821 | other | downstream | 1230998 | 10801705 ~ 10803356 (+) | False | XLOC_001951 |
| TCONS_00003825 | other | downstream | 1252048 | 10822755 ~ 10823448 (+) | True | XLOC_001951 |
| TCONS_00003827 | other | downstream | 1402103 | 10972810 ~ 10987302 (+) | False | XLOC_001952 |
