Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1001228 |
| length | 986 |
| lncRNA type | antisense_over |
| GC content | 0.34 |
| exon number | 3 |
| gene id | G879832 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 32876245 ~ 32902669 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1001182 | lncRNA | upstream | 59065 | 32816949 ~ 32817180 (+) | True | G879788 |
| TU1000117 | lncRNA | upstream | 87825 | 32788189 ~ 32788420 (+) | True | G878792 |
| TU1000042 | lncRNA | upstream | 93414 | 32782456 ~ 32782831 (+) | True | G878720 |
| TU999988 | lncRNA | upstream | 333524 | 32542192 ~ 32542721 (+) | True | G878669 |
| TU999852 | lncRNA | upstream | 497290 | 32378322 ~ 32378955 (+) | True | G878559 |
| TU1001248 | lncRNA | downstream | 31527 | 32934196 ~ 32936615 (+) | True | G879846 |
| TU1001280 | lncRNA | downstream | 43776 | 32946445 ~ 32946665 (+) | True | G879877 |
| TU1001282 | lncRNA | downstream | 49370 | 32952039 ~ 32952309 (+) | True | G879879 |
| TU1001255 | lncRNA | downstream | 58206 | 32960875 ~ 32962613 (+) | True | G879853 |
| TU1001243 | lncRNA | downstream | 80976 | 32983645 ~ 32990813 (+) | True | G879844 |
| XM_021618096.2 | mRNA | upstream | 96313 | 32639570 ~ 32779932 (+) | False | LOC110533664 |
| XM_021618097.2 | mRNA | upstream | 96313 | 32639572 ~ 32779932 (+) | True | LOC110533664 |
| XM_021618094.2 | mRNA | upstream | 241150 | 32599927 ~ 32635095 (+) | False | LOC110533663 |
| XM_036990084.1 | mRNA | downstream | 106718 | 33009387 ~ 33041014 (+) | False | LOC110533671 |
| XM_021619830.2 | mRNA | downstream | 158742 | 33061411 ~ 33063183 (+) | True | LOC110534913 |
| XM_021618110.2 | mRNA | downstream | 228174 | 33130843 ~ 33140211 (+) | False | LOC110533672 |
| XM_021618121.2 | mRNA | downstream | 565695 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618122.2 | mRNA | downstream | 565695 | 33468364 ~ 33491755 (+) | False | samsn1b |
| TU999098 | other | upstream | 1553645 | 31241810 ~ 31322600 (+) | True | LOC110534883 |
| TU999056 | other | upstream | 1670827 | 31205083 ~ 31205418 (+) | True | G877809 |
| TU997763 | other | upstream | 2120589 | 30748506 ~ 30755656 (+) | False | LOC110533640 |
| TU997764 | other | upstream | 2120632 | 30748506 ~ 30755613 (+) | True | LOC110533640 |
| TU997187 | other | upstream | 2853955 | 30021091 ~ 30022290 (+) | True | LOC110533629 |
| TU1001241 | other | downstream | 79197 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU1001378 | other | downstream | 228476 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001481 | other | downstream | 398096 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001972 | other | downstream | 1141825 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001973 | other | downstream | 1141825 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
