Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1001319 |
| length | 242 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G879914 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33052817 ~ 33053058 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1001240 | lncRNA | upstream | 7318 | 33040900 ~ 33045499 (+) | True | LOC110533671 |
| TU1001243 | lncRNA | upstream | 62004 | 32983645 ~ 32990813 (+) | True | G879844 |
| TU1001255 | lncRNA | upstream | 90204 | 32960875 ~ 32962613 (+) | True | G879853 |
| TU1001282 | lncRNA | upstream | 100508 | 32952039 ~ 32952309 (+) | True | G879879 |
| TU1001280 | lncRNA | upstream | 106152 | 32946445 ~ 32946665 (+) | True | G879877 |
| TU1001444 | lncRNA | downstream | 201617 | 33254675 ~ 33255017 (+) | True | G880032 |
| TU1001480 | lncRNA | downstream | 244156 | 33297214 ~ 33298232 (+) | True | G880068 |
| TU1001494 | lncRNA | downstream | 270914 | 33323972 ~ 33324235 (+) | True | G880080 |
| TU1001505 | lncRNA | downstream | 296522 | 33349580 ~ 33349805 (+) | True | G880091 |
| TU1001506 | lncRNA | downstream | 296756 | 33349814 ~ 33350044 (+) | True | G880092 |
| XM_036990084.1 | mRNA | upstream | 11803 | 33009387 ~ 33041014 (+) | False | LOC110533671 |
| XM_021618096.2 | mRNA | upstream | 272885 | 32639570 ~ 32779932 (+) | False | LOC110533664 |
| XM_021618097.2 | mRNA | upstream | 272885 | 32639572 ~ 32779932 (+) | True | LOC110533664 |
| XM_021618094.2 | mRNA | upstream | 417722 | 32599927 ~ 32635095 (+) | False | LOC110533663 |
| XM_021619830.2 | mRNA | downstream | 8353 | 33061411 ~ 33063183 (+) | True | LOC110534913 |
| XM_021618110.2 | mRNA | downstream | 77785 | 33130843 ~ 33140211 (+) | False | LOC110533672 |
| XM_021618121.2 | mRNA | downstream | 415306 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618122.2 | mRNA | downstream | 415306 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618123.2 | mRNA | downstream | 417764 | 33470822 ~ 33491755 (+) | False | samsn1b |
| TU1001241 | other | upstream | 7318 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU999098 | other | upstream | 1730217 | 31241810 ~ 31322600 (+) | True | LOC110534883 |
| TU999056 | other | upstream | 1847399 | 31205083 ~ 31205418 (+) | True | G877809 |
| TU997763 | other | upstream | 2297161 | 30748506 ~ 30755656 (+) | False | LOC110533640 |
| TU997764 | other | upstream | 2297204 | 30748506 ~ 30755613 (+) | True | LOC110533640 |
| TU1001378 | other | downstream | 78087 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001481 | other | downstream | 247707 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001972 | other | downstream | 991436 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001973 | other | downstream | 991436 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
| TU1003053 | other | downstream | 1381484 | 34434542 ~ 34435418 (+) | True | hsd20b2 |
