Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1001548 |
| length | 498 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G880134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33389962 ~ 33390459 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1001545 | lncRNA | upstream | 4275 | 33385310 ~ 33385687 (+) | True | G880131 |
| TU1001542 | lncRNA | upstream | 6537 | 33383108 ~ 33383425 (+) | True | G880128 |
| TU1001541 | lncRNA | upstream | 7041 | 33382720 ~ 33382921 (+) | True | G880127 |
| TU1001540 | lncRNA | upstream | 7900 | 33381563 ~ 33382062 (+) | True | G880126 |
| TU1001539 | lncRNA | upstream | 9152 | 33380299 ~ 33380810 (+) | True | G880125 |
| TU1001550 | lncRNA | downstream | 2163 | 33392622 ~ 33393105 (+) | True | G880136 |
| TU1001554 | lncRNA | downstream | 8364 | 33398823 ~ 33399050 (+) | True | G880140 |
| TU1001561 | lncRNA | downstream | 16745 | 33407204 ~ 33407459 (+) | True | G880147 |
| TU1001562 | lncRNA | downstream | 19101 | 33409560 ~ 33409817 (+) | True | G880148 |
| TU1001565 | lncRNA | downstream | 22868 | 33413327 ~ 33413603 (+) | True | G880151 |
| XM_021618110.2 | mRNA | upstream | 249751 | 33130843 ~ 33140211 (+) | False | LOC110533672 |
| XM_021619830.2 | mRNA | upstream | 326779 | 33061411 ~ 33063183 (+) | True | LOC110534913 |
| XM_036990084.1 | mRNA | upstream | 348948 | 33009387 ~ 33041014 (+) | False | LOC110533671 |
| XM_021618096.2 | mRNA | upstream | 610030 | 32639570 ~ 32779932 (+) | False | LOC110533664 |
| XM_021618121.2 | mRNA | downstream | 77905 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618122.2 | mRNA | downstream | 77905 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618123.2 | mRNA | downstream | 80363 | 33470822 ~ 33491755 (+) | False | samsn1b |
| XM_021618124.2 | mRNA | downstream | 88599 | 33479058 ~ 33491755 (+) | False | samsn1b |
| XM_021618128.2 | mRNA | downstream | 162849 | 33553308 ~ 33557914 (+) | True | serpinh1a |
| TU1001481 | other | upstream | 88224 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001378 | other | upstream | 255048 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001241 | other | upstream | 344463 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU999098 | other | upstream | 2067362 | 31241810 ~ 31322600 (+) | True | LOC110534883 |
| TU999056 | other | upstream | 2184544 | 31205083 ~ 31205418 (+) | True | G877809 |
| TU1001972 | other | downstream | 654035 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001973 | other | downstream | 654035 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
| TU1003053 | other | downstream | 1044083 | 34434542 ~ 34435418 (+) | True | hsd20b2 |
| TU1003066 | other | downstream | 1046881 | 34437340 ~ 34443357 (+) | True | LOC110533705 |
| TU1003062 | other | downstream | 1068335 | 34458794 ~ 34470378 (+) | True | rnasekb |
