Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1001561 |
| length | 256 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G880147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33407204 ~ 33407459 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1001554 | lncRNA | upstream | 8154 | 33398823 ~ 33399050 (+) | True | G880140 |
| TU1001550 | lncRNA | upstream | 14099 | 33392622 ~ 33393105 (+) | True | G880136 |
| TU1001548 | lncRNA | upstream | 16745 | 33389962 ~ 33390459 (+) | True | G880134 |
| TU1001545 | lncRNA | upstream | 21517 | 33385310 ~ 33385687 (+) | True | G880131 |
| TU1001542 | lncRNA | upstream | 23779 | 33383108 ~ 33383425 (+) | True | G880128 |
| TU1001562 | lncRNA | downstream | 2101 | 33409560 ~ 33409817 (+) | True | G880148 |
| TU1001565 | lncRNA | downstream | 5868 | 33413327 ~ 33413603 (+) | True | G880151 |
| TU1001566 | lncRNA | downstream | 6237 | 33413696 ~ 33413936 (+) | True | G880152 |
| TU1001577 | lncRNA | downstream | 75718 | 33483177 ~ 33492333 (+) | False | samsn1b |
| TU1001579 | lncRNA | downstream | 75718 | 33483177 ~ 33492333 (+) | True | samsn1b |
| XM_021618110.2 | mRNA | upstream | 266993 | 33130843 ~ 33140211 (+) | False | LOC110533672 |
| XM_021619830.2 | mRNA | upstream | 344021 | 33061411 ~ 33063183 (+) | True | LOC110534913 |
| XM_036990084.1 | mRNA | upstream | 366190 | 33009387 ~ 33041014 (+) | False | LOC110533671 |
| XM_021618096.2 | mRNA | upstream | 627272 | 32639570 ~ 32779932 (+) | False | LOC110533664 |
| XM_021618121.2 | mRNA | downstream | 60905 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618122.2 | mRNA | downstream | 60905 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618123.2 | mRNA | downstream | 63363 | 33470822 ~ 33491755 (+) | False | samsn1b |
| XM_021618124.2 | mRNA | downstream | 71599 | 33479058 ~ 33491755 (+) | False | samsn1b |
| XM_021618128.2 | mRNA | downstream | 145849 | 33553308 ~ 33557914 (+) | True | serpinh1a |
| TU1001481 | other | upstream | 105466 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001378 | other | upstream | 272290 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001241 | other | upstream | 361705 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU999098 | other | upstream | 2084604 | 31241810 ~ 31322600 (+) | True | LOC110534883 |
| TU999056 | other | upstream | 2201786 | 31205083 ~ 31205418 (+) | True | G877809 |
| TU1001972 | other | downstream | 637035 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001973 | other | downstream | 637035 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
| TU1003053 | other | downstream | 1027083 | 34434542 ~ 34435418 (+) | True | hsd20b2 |
| TU1003066 | other | downstream | 1029881 | 34437340 ~ 34443357 (+) | True | LOC110533705 |
| TU1003062 | other | downstream | 1051335 | 34458794 ~ 34470378 (+) | True | rnasekb |
