Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1001664 |
| length | 360 |
| lncRNA type | read_through |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G880234 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33530649 ~ 33562850 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1001577 | lncRNA | upstream | 38316 | 33483177 ~ 33492333 (+) | False | samsn1b |
| TU1001579 | lncRNA | upstream | 38316 | 33483177 ~ 33492333 (+) | True | samsn1b |
| TU1001566 | lncRNA | upstream | 116713 | 33413696 ~ 33413936 (+) | True | G880152 |
| TU1001565 | lncRNA | upstream | 117046 | 33413327 ~ 33413603 (+) | True | G880151 |
| TU1001562 | lncRNA | upstream | 120832 | 33409560 ~ 33409817 (+) | True | G880148 |
| TU1001771 | lncRNA | downstream | 144814 | 33707664 ~ 33707872 (+) | True | G880338 |
| TU1001772 | lncRNA | downstream | 146245 | 33709095 ~ 33737521 (+) | True | G880339 |
| TU1001810 | lncRNA | downstream | 195698 | 33758548 ~ 33759801 (+) | True | G880373 |
| TU1001784 | lncRNA | downstream | 348758 | 33911608 ~ 33913890 (+) | True | dscama |
| TU1001913 | lncRNA | downstream | 376585 | 33939435 ~ 33973224 (+) | True | G880468 |
| XM_021618121.2 | mRNA | upstream | 38894 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618122.2 | mRNA | upstream | 38894 | 33468364 ~ 33491755 (+) | False | samsn1b |
| XM_021618123.2 | mRNA | upstream | 38894 | 33470822 ~ 33491755 (+) | False | samsn1b |
| XM_021618124.2 | mRNA | upstream | 38894 | 33479058 ~ 33491755 (+) | False | samsn1b |
| XM_021618110.2 | mRNA | upstream | 390438 | 33130843 ~ 33140211 (+) | False | LOC110533672 |
| LOC110533682 | mRNA | downstream | 5587 | 33568437 ~ 33569230 (+) | True | LOC110533682 |
| XM_021618129.2 | mRNA | downstream | 12559 | 33575409 ~ 33593092 (+) | False | acer3 |
| XM_036990089.1 | mRNA | downstream | 15718 | 33578568 ~ 33593092 (+) | False | acer3 |
| XM_036990090.1 | mRNA | downstream | 18078 | 33580928 ~ 33593092 (+) | True | acer3 |
| XM_021618131.2 | mRNA | downstream | 53534 | 33616384 ~ 33621122 (+) | True | LOC100136017 |
| TU1001481 | other | upstream | 228911 | 33300765 ~ 33301738 (+) | True | G880069 |
| TU1001378 | other | upstream | 395735 | 33131145 ~ 33134914 (+) | True | LOC110533672 |
| TU1001241 | other | upstream | 485150 | 32981866 ~ 33045499 (+) | False | LOC110533671 |
| TU999098 | other | upstream | 2208049 | 31241810 ~ 31322600 (+) | True | LOC110534883 |
| TU999056 | other | upstream | 2325231 | 31205083 ~ 31205418 (+) | True | G877809 |
| TU1001972 | other | downstream | 481644 | 34044494 ~ 34047678 (+) | False | LOC110533688 |
| TU1001973 | other | downstream | 481644 | 34044494 ~ 34047724 (+) | True | LOC110533688 |
| TU1003053 | other | downstream | 871692 | 34434542 ~ 34435418 (+) | True | hsd20b2 |
| TU1003066 | other | downstream | 874490 | 34437340 ~ 34443357 (+) | True | LOC110533705 |
| TU1003062 | other | downstream | 895944 | 34458794 ~ 34470378 (+) | True | rnasekb |
