Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1003522 |
| length | 447 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G881949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34681520 ~ 34681966 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1003520 | lncRNA | downstream | 1938 | 34679345 ~ 34679582 (-) | True | G881947 |
| TU1003518 | lncRNA | downstream | 3880 | 34677400 ~ 34677640 (-) | True | G881945 |
| TU1003496 | lncRNA | downstream | 37811 | 34643479 ~ 34643709 (-) | True | G881924 |
| TU1003488 | lncRNA | downstream | 44620 | 34636418 ~ 34636900 (-) | True | G881916 |
| TU1003477 | lncRNA | downstream | 60134 | 34617598 ~ 34621386 (-) | True | G881905 |
| TU1003523 | lncRNA | upstream | 209 | 34682175 ~ 34682401 (-) | True | G881950 |
| TU1003525 | lncRNA | upstream | 4194 | 34686160 ~ 34686376 (-) | True | G881952 |
| TU1003526 | lncRNA | upstream | 5099 | 34687065 ~ 34687348 (-) | True | G881953 |
| TU1003491 | lncRNA | upstream | 57357 | 34739323 ~ 34741133 (-) | True | G881919 |
| TU1003569 | lncRNA | upstream | 104120 | 34786086 ~ 34786287 (-) | True | G881995 |
| XM_036989345.1 | mRNA | downstream | 82513 | 34597247 ~ 34599007 (-) | False | LOC110534894 |
| XM_036990111.1 | mRNA | downstream | 85257 | 34589717 ~ 34596263 (-) | False | LOC110533714 |
| XM_036990113.1 | mRNA | downstream | 85257 | 34592911 ~ 34596263 (-) | False | LOC110533714 |
| XM_036990112.1 | mRNA | downstream | 85997 | 34589717 ~ 34595523 (-) | False | LOC110533714 |
| XM_021618172.2 | mRNA | downstream | 152743 | 34521230 ~ 34528777 (-) | True | ap4m1 |
| XM_021618186.2 | mRNA | upstream | 209093 | 34891059 ~ 34893957 (-) | False | LOC110533718 |
| XR_005034353.1 | mRNA | upstream | 242965 | 34924931 ~ 34925923 (-) | True | LOC118936924 |
| XM_021618189.2 | mRNA | upstream | 271885 | 34953851 ~ 34967269 (-) | True | si:ch211-284e13.4 |
| XM_021618191.2 | mRNA | upstream | 298216 | 34980182 ~ 34989463 (-) | True | si:ch211-284e13.6 |
| XM_036990116.1 | mRNA | upstream | 310391 | 34992357 ~ 35012867 (-) | True | gucy2d |
| TU1003456 | other | downstream | 82845 | 34598367 ~ 34598675 (-) | True | LOC110534894 |
| TU1003400 | other | downstream | 85338 | 34592322 ~ 34596182 (-) | True | LOC110533714 |
| TU1003325 | other | downstream | 264259 | 34413063 ~ 34417261 (-) | True | G881778 |
| TU1002672 | other | downstream | 708208 | 33939435 ~ 33973312 (-) | True | LOC110533687 |
| TU1002671 | other | downstream | 708280 | 33939435 ~ 33973240 (-) | False | LOC110533687 |
| TU1003687 | other | upstream | 211013 | 34892979 ~ 34893928 (-) | True | LOC110533718 |
| TU1004252 | other | upstream | 620948 | 35302914 ~ 35304055 (-) | True | G882578 |
| TU1004213 | other | upstream | 638848 | 35320814 ~ 35321706 (-) | True | G882539 |
| TU1004310 | other | upstream | 745283 | 35427249 ~ 35428208 (-) | True | G882631 |
| TU1004715 | other | upstream | 916351 | 35598317 ~ 35599085 (-) | True | G882971 |
