Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1003878 |
| length | 339 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G882271 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 35179646 ~ 35179984 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1003874 | lncRNA | upstream | 4822 | 35171987 ~ 35174824 (+) | True | G882267 |
| TU1003870 | lncRNA | upstream | 18984 | 35160310 ~ 35160662 (+) | True | G882264 |
| TU1003842 | lncRNA | upstream | 58430 | 35120285 ~ 35121216 (+) | True | G882236 |
| TU1003843 | lncRNA | upstream | 59674 | 35119017 ~ 35119972 (+) | True | G882237 |
| TU1003840 | lncRNA | upstream | 62118 | 35117304 ~ 35117528 (+) | True | G882234 |
| TU1003879 | lncRNA | downstream | 50 | 35180034 ~ 35180331 (+) | True | G882272 |
| TU1003903 | lncRNA | downstream | 37981 | 35217965 ~ 35218391 (+) | True | G882293 |
| TU1003919 | lncRNA | downstream | 45672 | 35225656 ~ 35228524 (+) | True | G882299 |
| TU1003925 | lncRNA | downstream | 48882 | 35228866 ~ 35234190 (+) | False | G882301 |
| TU1003926 | lncRNA | downstream | 48882 | 35228866 ~ 35232501 (+) | True | G882301 |
| XM_021618196.2 | mRNA | upstream | 116182 | 35050938 ~ 35063464 (+) | True | LOC110533726 |
| XM_021618190.2 | mRNA | upstream | 204560 | 34971817 ~ 34975086 (+) | True | LOC110533722 |
| XM_021618187.2 | mRNA | upstream | 230370 | 34945726 ~ 34949276 (+) | False | LOC110533719 |
| XM_036990115.1 | mRNA | upstream | 438195 | 34722868 ~ 34741451 (+) | False | LOC110533717 |
| XM_021618211.2 | mRNA | downstream | 17967 | 35197951 ~ 35203782 (+) | True | gltpd2 |
| XM_021618214.2 | mRNA | downstream | 127769 | 35307753 ~ 35319426 (+) | False | mogat3b |
| XR_005053626.1 | mRNA | downstream | 178057 | 35358041 ~ 35362540 (+) | True | LOC118966749 |
| XM_021619817.2 | mRNA | downstream | 204486 | 35384470 ~ 35385650 (+) | True | LOC110534898 |
| XM_021619820.2 | mRNA | downstream | 229152 | 35409136 ~ 35410259 (+) | True | LOC110534900 |
| TU1003871 | other | upstream | 16140 | 35161348 ~ 35163506 (+) | True | G882265 |
| TU1003830 | other | upstream | 70255 | 35107462 ~ 35109391 (+) | True | G882225 |
| TU1003805 | other | upstream | 103679 | 35075598 ~ 35075967 (+) | True | G882202 |
| TU1003587 | other | upstream | 368117 | 34808602 ~ 34811529 (+) | True | G882013 |
| TU1003162 | other | upstream | 545739 | 34622641 ~ 34633907 (+) | False | LOC110533716 |
| TU1003922 | other | downstream | 45113 | 35225097 ~ 35235225 (+) | False | G882300 |
| TU1003908 | other | downstream | 136467 | 35316451 ~ 35319996 (+) | False | mogat3b |
| TU1003912 | other | downstream | 138516 | 35318500 ~ 35321801 (+) | False | mogat3b |
| TU1003914 | other | downstream | 138516 | 35318500 ~ 35321801 (+) | True | mogat3b |
| TU1004303 | other | downstream | 234991 | 35414975 ~ 35416238 (+) | True | G882624 |
