Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1005386 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G883535 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36344901 ~ 36345134 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1005380 | lncRNA | upstream | 4350 | 36340038 ~ 36340551 (+) | True | G883529 |
| TU1005379 | lncRNA | upstream | 5065 | 36339503 ~ 36339836 (+) | True | G883528 |
| TU1005374 | lncRNA | upstream | 11215 | 36333465 ~ 36333686 (+) | True | G883523 |
| TU1005364 | lncRNA | upstream | 18458 | 36317104 ~ 36326443 (+) | True | G883513 |
| TU1005308 | lncRNA | upstream | 49329 | 36293314 ~ 36295572 (+) | False | G883473 |
| TU1005326 | lncRNA | downstream | 4992 | 36350126 ~ 36350436 (+) | False | LOC110533776 |
| TU1005327 | lncRNA | downstream | 5363 | 36350497 ~ 36364207 (+) | True | LOC110533776 |
| TU1005401 | lncRNA | downstream | 41298 | 36386432 ~ 36388747 (+) | True | G883550 |
| TU1005403 | lncRNA | downstream | 44166 | 36389300 ~ 36390922 (+) | False | G883552 |
| TU1005404 | lncRNA | downstream | 44791 | 36389925 ~ 36390922 (+) | True | G883552 |
| XM_021618286.2 | mRNA | upstream | 41237 | 36301854 ~ 36303664 (+) | True | LOC110533775 |
| XM_021618283.2 | mRNA | upstream | 88277 | 36248874 ~ 36256624 (+) | False | LOC110533771 |
| XM_036990177.1 | mRNA | upstream | 88277 | 36249009 ~ 36256624 (+) | True | LOC110533771 |
| XM_036990176.1 | mRNA | upstream | 98586 | 36219367 ~ 36246315 (+) | False | LOC110533770 |
| XM_036990183.1 | mRNA | downstream | 4936 | 36350070 ~ 36377139 (+) | False | LOC110533776 |
| XM_021618287.2 | mRNA | downstream | 4937 | 36350071 ~ 36377139 (+) | False | LOC110533776 |
| XM_021618291.2 | mRNA | downstream | 300586 | 36645720 ~ 36650306 (+) | True | tmprss4b |
| XM_021618293.2 | mRNA | downstream | 338732 | 36683866 ~ 36698702 (+) | False | LOC110533779 |
| XM_036990190.1 | mRNA | downstream | 338732 | 36683866 ~ 36698702 (+) | True | LOC110533779 |
| TU1005301 | other | upstream | 49354 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 658328 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1004303 | other | upstream | 928663 | 35414975 ~ 35416238 (+) | True | G882624 |
| TU1003912 | other | upstream | 1023100 | 35318500 ~ 35321801 (+) | False | mogat3b |
| TU1005835 | other | downstream | 454251 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005877 | other | downstream | 504512 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1008492 | other | downstream | 2410375 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1012334 | other | downstream | 5367193 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 5367193 | 41712327 ~ 41717292 (+) | False | G889906 |
