Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1005406 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G883554 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36393073 ~ 36393318 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1005403 | lncRNA | upstream | 2151 | 36389300 ~ 36390922 (+) | False | G883552 |
| TU1005404 | lncRNA | upstream | 2151 | 36389925 ~ 36390922 (+) | True | G883552 |
| TU1005401 | lncRNA | upstream | 4326 | 36386432 ~ 36388747 (+) | True | G883550 |
| TU1005327 | lncRNA | upstream | 28866 | 36350497 ~ 36364207 (+) | True | LOC110533776 |
| TU1005326 | lncRNA | upstream | 42637 | 36350126 ~ 36350436 (+) | False | LOC110533776 |
| TU1005407 | lncRNA | downstream | 79 | 36393397 ~ 36393598 (+) | True | G883555 |
| TU1005329 | lncRNA | downstream | 1511 | 36394829 ~ 36395502 (+) | True | G883481 |
| TU1005328 | lncRNA | downstream | 3714 | 36397032 ~ 36400250 (+) | True | G883480 |
| TU1005408 | lncRNA | downstream | 7033 | 36400351 ~ 36400949 (+) | True | G883556 |
| TU1005410 | lncRNA | downstream | 8554 | 36401872 ~ 36402398 (+) | True | G883558 |
| XM_036990183.1 | mRNA | upstream | 15934 | 36350070 ~ 36377139 (+) | False | LOC110533776 |
| XM_021618287.2 | mRNA | upstream | 15934 | 36350071 ~ 36377139 (+) | False | LOC110533776 |
| XM_021618286.2 | mRNA | upstream | 89409 | 36301854 ~ 36303664 (+) | True | LOC110533775 |
| XM_021618283.2 | mRNA | upstream | 136449 | 36248874 ~ 36256624 (+) | False | LOC110533771 |
| XM_021618291.2 | mRNA | downstream | 252402 | 36645720 ~ 36650306 (+) | True | tmprss4b |
| XM_021618293.2 | mRNA | downstream | 290548 | 36683866 ~ 36698702 (+) | False | LOC110533779 |
| XM_036990190.1 | mRNA | downstream | 290548 | 36683866 ~ 36698702 (+) | True | LOC110533779 |
| LOC110533102 | mRNA | downstream | 309400 | 36702718 ~ 36704449 (+) | False | LOC110533102 |
| XR_005053648.1 | mRNA | downstream | 318633 | 36711951 ~ 36713863 (+) | True | LOC110533781 |
| TU1005301 | other | upstream | 97526 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 706500 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1004303 | other | upstream | 976835 | 35414975 ~ 35416238 (+) | True | G882624 |
| TU1003912 | other | upstream | 1071272 | 35318500 ~ 35321801 (+) | False | mogat3b |
| TU1005835 | other | downstream | 406067 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005877 | other | downstream | 456328 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1008492 | other | downstream | 2362191 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1012334 | other | downstream | 5319009 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 5319009 | 41712327 ~ 41717292 (+) | False | G889906 |
