Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1005699 |
| length | 282 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G883822 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36578014 ~ 36578453 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1005664 | lncRNA | downstream | 13115 | 36530408 ~ 36564899 (-) | True | G883791 |
| TU1005682 | lncRNA | downstream | 24074 | 36552139 ~ 36553940 (-) | True | G883808 |
| TU1005635 | lncRNA | downstream | 91472 | 36428571 ~ 36486542 (-) | True | G883765 |
| TU1005641 | lncRNA | downstream | 132914 | 36442425 ~ 36445100 (-) | True | G883768 |
| TU1005578 | lncRNA | downstream | 182514 | 36394801 ~ 36395500 (-) | True | G883713 |
| TU1005666 | lncRNA | upstream | 19914 | 36598367 ~ 36604099 (-) | True | LOC118966763 |
| TU1006327 | lncRNA | upstream | 60805 | 36639258 ~ 36639500 (-) | True | G884366 |
| TU1006328 | lncRNA | upstream | 61773 | 36640226 ~ 36640448 (-) | True | G884367 |
| TU1006340 | lncRNA | upstream | 79377 | 36657830 ~ 36658233 (-) | True | G884379 |
| TU1006352 | lncRNA | upstream | 93799 | 36672252 ~ 36674008 (-) | False | LOC110533101 |
| XM_036990179.1 | mRNA | downstream | 236195 | 36303733 ~ 36341819 (-) | True | LOC110533773 |
| XM_036990181.1 | mRNA | downstream | 236196 | 36303733 ~ 36341818 (-) | False | LOC110533773 |
| XM_036990180.1 | mRNA | downstream | 251303 | 36303733 ~ 36326711 (-) | False | LOC110533773 |
| XM_036990182.1 | mRNA | downstream | 258400 | 36303733 ~ 36319614 (-) | False | LOC110533773 |
| NM_001124693.2 | mRNA | downstream | 282497 | 36293313 ~ 36295517 (-) | True | epd |
| XR_005053646.1 | mRNA | upstream | 19919 | 36598372 ~ 36604502 (-) | False | LOC118966763 |
| XM_021618288.2 | mRNA | upstream | 39678 | 36618131 ~ 36634904 (-) | False | tmprss13b |
| XM_021618289.2 | mRNA | upstream | 39678 | 36618131 ~ 36635441 (-) | True | tmprss13b |
| XM_036990186.1 | mRNA | upstream | 74254 | 36652707 ~ 36665717 (-) | False | scn4bb |
| XM_036990187.1 | mRNA | upstream | 74254 | 36652707 ~ 36665717 (-) | False | scn4bb |
| TU1005624 | other | downstream | 185487 | 36391103 ~ 36392527 (-) | True | G883754 |
| TU1005623 | other | downstream | 187100 | 36389997 ~ 36390914 (-) | True | G883753 |
| TU1004896 | other | downstream | 697063 | 35880524 ~ 35880951 (-) | True | G883128 |
| TU1004715 | other | downstream | 978929 | 35598317 ~ 35599085 (-) | True | G882971 |
| TU1004310 | other | downstream | 1149806 | 35427249 ~ 35428208 (-) | True | G882631 |
| TU1006338 | other | upstream | 81065 | 36659518 ~ 36665357 (-) | True | scn4bb |
| TU1006746 | other | upstream | 738464 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1007025 | other | upstream | 1020180 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1007856 | other | upstream | 1660497 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1009059 | other | upstream | 2605245 | 39183698 ~ 39185494 (-) | True | rpl36a |
