Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1006340 |
| length | 404 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G884379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36657830 ~ 36658233 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1006328 | lncRNA | downstream | 17382 | 36640226 ~ 36640448 (-) | True | G884367 |
| TU1006327 | lncRNA | downstream | 18330 | 36639258 ~ 36639500 (-) | True | G884366 |
| TU1005666 | lncRNA | downstream | 53731 | 36598367 ~ 36604099 (-) | True | LOC118966763 |
| TU1005699 | lncRNA | downstream | 79377 | 36578014 ~ 36578453 (-) | True | G883822 |
| TU1005664 | lncRNA | downstream | 92931 | 36530408 ~ 36564899 (-) | True | G883791 |
| TU1006352 | lncRNA | upstream | 14019 | 36672252 ~ 36674008 (-) | False | LOC110533101 |
| TU1006353 | lncRNA | upstream | 14165 | 36672398 ~ 36673844 (-) | False | LOC110533101 |
| TU1006355 | lncRNA | upstream | 14165 | 36672398 ~ 36674008 (-) | False | LOC110533101 |
| TU1006351 | lncRNA | upstream | 14243 | 36672476 ~ 36673844 (-) | False | LOC110533101 |
| TU1006354 | lncRNA | upstream | 14243 | 36672476 ~ 36674008 (-) | True | LOC110533101 |
| XM_021618289.2 | mRNA | downstream | 22389 | 36618131 ~ 36635441 (-) | True | tmprss13b |
| XM_021618288.2 | mRNA | downstream | 22926 | 36618131 ~ 36634904 (-) | False | tmprss13b |
| XR_005053646.1 | mRNA | downstream | 53328 | 36598372 ~ 36604502 (-) | False | LOC118966763 |
| XM_036990184.1 | mRNA | downstream | 64882 | 36398940 ~ 36592948 (-) | False | LOC110533100 |
| XM_036990189.1 | mRNA | upstream | 14134 | 36672367 ~ 36682903 (-) | False | LOC110533101 |
| XM_021618294.2 | mRNA | upstream | 46214 | 36704447 ~ 36711929 (-) | False | LOC110533780 |
| XM_021618295.2 | mRNA | upstream | 46214 | 36704447 ~ 36711929 (-) | False | LOC110533780 |
| XM_036990191.1 | mRNA | upstream | 46616 | 36704849 ~ 36711929 (-) | True | LOC110533780 |
| XM_036990192.1 | mRNA | upstream | 75483 | 36733716 ~ 36746690 (-) | True | LOC110533103 |
| TU1005624 | other | downstream | 265303 | 36391103 ~ 36392527 (-) | True | G883754 |
| TU1005623 | other | downstream | 266916 | 36389997 ~ 36390914 (-) | True | G883753 |
| TU1004896 | other | downstream | 776879 | 35880524 ~ 35880951 (-) | True | G883128 |
| TU1004715 | other | downstream | 1058745 | 35598317 ~ 35599085 (-) | True | G882971 |
| TU1004310 | other | downstream | 1229622 | 35427249 ~ 35428208 (-) | True | G882631 |
| TU1006338 | other | upstream | 1285 | 36659518 ~ 36665357 (-) | True | scn4bb |
| TU1006746 | other | upstream | 658684 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1007025 | other | upstream | 940400 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1007856 | other | upstream | 1580717 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1009059 | other | upstream | 2525465 | 39183698 ~ 39185494 (-) | True | rpl36a |
