Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1007198 |
| length | 260 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G885162 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 37761426 ~ 37762047 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1006991 | lncRNA | upstream | 50831 | 37704081 ~ 37710595 (+) | True | LOC118966772 |
| TU1006907 | lncRNA | upstream | 168020 | 37593156 ~ 37593406 (+) | True | G884884 |
| TU1006899 | lncRNA | upstream | 175803 | 37585406 ~ 37585623 (+) | True | G884876 |
| TU1006896 | lncRNA | upstream | 178869 | 37582355 ~ 37582557 (+) | True | G884873 |
| TU1006892 | lncRNA | upstream | 181856 | 37579366 ~ 37579570 (+) | True | G884869 |
| TU1007284 | lncRNA | downstream | 29400 | 37791447 ~ 37791664 (+) | True | G885244 |
| TU1007292 | lncRNA | downstream | 35759 | 37797806 ~ 37798046 (+) | True | G885252 |
| TU1007305 | lncRNA | downstream | 44606 | 37806653 ~ 37806951 (+) | True | G885265 |
| TU1007309 | lncRNA | downstream | 52583 | 37814630 ~ 37814829 (+) | True | G885269 |
| TU1007313 | lncRNA | downstream | 58725 | 37820772 ~ 37821054 (+) | True | G885273 |
| XR_005053659.1 | mRNA | upstream | 50743 | 37704049 ~ 37710683 (+) | False | LOC118966772 |
| XR_005053657.1 | mRNA | upstream | 242917 | 37510479 ~ 37518509 (+) | True | agtr2 |
| XM_036990213.1 | mRNA | upstream | 244310 | 37497022 ~ 37517116 (+) | False | agtr2 |
| XM_021618353.2 | mRNA | upstream | 263880 | 37478921 ~ 37497546 (+) | True | LOC110533821 |
| XM_021618352.2 | mRNA | upstream | 282698 | 37419093 ~ 37478728 (+) | False | LOC110533820 |
| XM_021618359.2 | mRNA | downstream | 114881 | 37876928 ~ 37896375 (+) | False | LOC110533825 |
| XM_021618358.2 | mRNA | downstream | 114887 | 37876934 ~ 37896375 (+) | True | LOC110533825 |
| XM_021618370.2 | mRNA | downstream | 211292 | 37973339 ~ 37992659 (+) | False | LOC110533830 |
| XM_021618371.2 | mRNA | downstream | 240552 | 38002599 ~ 38039709 (+) | False | msna |
| XM_021618372.2 | mRNA | downstream | 254572 | 38016619 ~ 38039709 (+) | True | msna |
| TU1005877 | other | upstream | 910273 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1005835 | other | upstream | 959841 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005301 | other | upstream | 1465879 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 2074853 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1004303 | other | upstream | 2345188 | 35414975 ~ 35416238 (+) | True | G882624 |
| TU1008492 | other | downstream | 993462 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1012334 | other | downstream | 3950280 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 3950280 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012336 | other | downstream | 3950280 | 41712327 ~ 41717292 (+) | True | G889906 |
| TU1012699 | other | downstream | 4316168 | 42078215 ~ 42153778 (+) | False | G890228 |
