Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1008006 |
| length | 362 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 4 |
| gene id | G885903 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 38397492 ~ 38397953 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1007967 | lncRNA | downstream | 41980 | 38355313 ~ 38355512 (-) | True | G885869 |
| TU1007933 | lncRNA | downstream | 104460 | 38292792 ~ 38293032 (-) | True | G885840 |
| TU1007919 | lncRNA | downstream | 161718 | 38235418 ~ 38235774 (-) | True | G885827 |
| TU1007848 | lncRNA | downstream | 222135 | 38117202 ~ 38175357 (-) | True | G885761 |
| TU1007577 | lncRNA | downstream | 333238 | 38062852 ~ 38064254 (-) | True | G885509 |
| TU1008054 | lncRNA | upstream | 39483 | 38437436 ~ 38437731 (-) | True | G885950 |
| TU1008108 | lncRNA | upstream | 70732 | 38468685 ~ 38469374 (-) | True | G885999 |
| TU1008145 | lncRNA | upstream | 92153 | 38490106 ~ 38490384 (-) | True | G886035 |
| TU1008159 | lncRNA | upstream | 99148 | 38497101 ~ 38497311 (-) | True | G886049 |
| TU1008164 | lncRNA | upstream | 104384 | 38502337 ~ 38502642 (-) | True | G886054 |
| XM_021618378.2 | mRNA | downstream | 117486 | 38245016 ~ 38280006 (-) | True | LOC110533838 |
| XM_021618376.2 | mRNA | downstream | 261761 | 38127426 ~ 38135731 (-) | False | LOC110533836 |
| XM_021618377.2 | mRNA | downstream | 261761 | 38127426 ~ 38135731 (-) | True | LOC110533836 |
| XM_021618373.2 | mRNA | downstream | 284676 | 38065806 ~ 38112816 (-) | True | arhgap20b |
| XM_021618374.2 | mRNA | downstream | 284677 | 38065806 ~ 38112815 (-) | False | arhgap20b |
| XM_021618384.2 | mRNA | upstream | 147099 | 38545052 ~ 38617748 (-) | True | LOC110533842 |
| XM_021618398.2 | mRNA | upstream | 530516 | 38928469 ~ 38945302 (-) | False | LOC110533851 |
| XM_021618397.2 | mRNA | upstream | 530516 | 38928469 ~ 38945732 (-) | False | LOC110533851 |
| XM_036990225.1 | mRNA | upstream | 530516 | 38928469 ~ 38945732 (-) | True | LOC110533851 |
| XM_021618404.2 | mRNA | upstream | 554655 | 38952608 ~ 38971312 (-) | False | LOC110533854 |
| TU1007856 | other | downstream | 156933 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1007025 | other | downstream | 693706 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1006746 | other | downstream | 1078628 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1006338 | other | downstream | 1732135 | 36659518 ~ 36665357 (-) | True | scn4bb |
| TU1005624 | other | downstream | 2004965 | 36391103 ~ 36392527 (-) | True | G883754 |
| TU1009059 | other | upstream | 785745 | 39183698 ~ 39185494 (-) | True | rpl36a |
| TU1009518 | other | upstream | 819360 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1010435 | other | upstream | 1457013 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1010822 | other | upstream | 2098761 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1012917 | other | upstream | 3584748 | 41982701 ~ 41984417 (-) | True | G890360 |
