Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1009121 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 1 |
| gene id | G886946 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39201031 ~ 39201263 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1009115 | lncRNA | downstream | 3474 | 39197198 ~ 39197557 (-) | True | G886940 |
| TU1009113 | lncRNA | downstream | 5106 | 39195726 ~ 39195925 (-) | True | G886938 |
| TU1009111 | lncRNA | downstream | 6185 | 39194631 ~ 39194846 (-) | True | G886936 |
| TU1009060 | lncRNA | downstream | 6551 | 39194095 ~ 39194480 (-) | True | G886887 |
| TU1009104 | lncRNA | downstream | 13688 | 39187124 ~ 39187343 (-) | True | G886929 |
| TU1009122 | lncRNA | upstream | 193 | 39201456 ~ 39201736 (-) | True | G886947 |
| TU1009125 | lncRNA | upstream | 2045 | 39203308 ~ 39203563 (-) | True | G886950 |
| TU1009513 | lncRNA | upstream | 8091 | 39209354 ~ 39209775 (-) | True | G887324 |
| TU1009517 | lncRNA | upstream | 14646 | 39215909 ~ 39216176 (-) | True | G887328 |
| TU1009522 | lncRNA | upstream | 20268 | 39221531 ~ 39221776 (-) | True | G887333 |
| XR_005034354.1 | mRNA | downstream | 1110 | 39197965 ~ 39199921 (-) | True | LOC110533862 |
| XM_021618418.2 | mRNA | downstream | 15453 | 39183759 ~ 39185578 (-) | False | rpl36a |
| LOC110534920 | mRNA | downstream | 79193 | 39120154 ~ 39121838 (-) | True | LOC110534920 |
| XM_021618412.2 | mRNA | downstream | 104955 | 39024243 ~ 39096076 (-) | False | LOC110533857 |
| XM_036990229.1 | mRNA | upstream | 108923 | 39310186 ~ 39634685 (-) | False | LOC110533864 |
| XM_036990230.1 | mRNA | upstream | 108923 | 39310186 ~ 39634685 (-) | False | LOC110533864 |
| XM_036990231.1 | mRNA | upstream | 108923 | 39310186 ~ 39634685 (-) | False | LOC110533864 |
| XM_036990232.1 | mRNA | upstream | 108923 | 39310186 ~ 39634685 (-) | False | LOC110533864 |
| XM_036990233.1 | mRNA | upstream | 108923 | 39310186 ~ 39634685 (-) | False | LOC110533864 |
| TU1009059 | other | downstream | 15537 | 39183698 ~ 39185494 (-) | True | rpl36a |
| TU1007856 | other | downstream | 960472 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1007025 | other | downstream | 1497245 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1006746 | other | downstream | 1882167 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1006338 | other | downstream | 2535674 | 36659518 ~ 36665357 (-) | True | scn4bb |
| TU1009518 | other | upstream | 16050 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1010435 | other | upstream | 653703 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1010822 | other | upstream | 1295451 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1012917 | other | upstream | 2781438 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1012952 | other | upstream | 2786448 | 41987711 ~ 41989801 (-) | False | G890385 |
