Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1009747 |
| length | 525 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G887535 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39600565 ~ 39601211 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1009735 | lncRNA | downstream | 12585 | 39581142 ~ 39587980 (-) | True | G887529 |
| TU1009742 | lncRNA | downstream | 13443 | 39585291 ~ 39587122 (-) | True | G887532 |
| TU1009740 | lncRNA | downstream | 13968 | 39583113 ~ 39586597 (-) | True | G887530 |
| TU1009731 | lncRNA | downstream | 19773 | 39580026 ~ 39580792 (-) | True | G887528 |
| TU1009616 | lncRNA | downstream | 238216 | 39359314 ~ 39362349 (-) | True | G887416 |
| TU1009778 | lncRNA | upstream | 39588 | 39640799 ~ 39641246 (-) | True | G887564 |
| TU1009777 | lncRNA | upstream | 40326 | 39641537 ~ 39641759 (-) | True | G887563 |
| TU1009809 | lncRNA | upstream | 133656 | 39734867 ~ 39735143 (-) | True | G887595 |
| TU1009810 | lncRNA | upstream | 134388 | 39735599 ~ 39735802 (-) | True | G887596 |
| TU1009820 | lncRNA | upstream | 147847 | 39749058 ~ 39749338 (-) | True | G887606 |
| XR_005034354.1 | mRNA | downstream | 400644 | 39197965 ~ 39199921 (-) | True | LOC110533862 |
| XM_021618418.2 | mRNA | downstream | 414987 | 39183759 ~ 39185578 (-) | False | rpl36a |
| LOC110534920 | mRNA | downstream | 478727 | 39120154 ~ 39121838 (-) | True | LOC110534920 |
| XM_021618413.2 | mRNA | downstream | 504489 | 39024243 ~ 39096076 (-) | False | LOC110533857 |
| XM_021618425.2 | mRNA | upstream | 40777 | 39641988 ~ 39671372 (-) | False | LOC110533865 |
| XM_036990247.1 | mRNA | upstream | 40777 | 39641988 ~ 39671375 (-) | False | LOC110533865 |
| XM_036990246.1 | mRNA | upstream | 40777 | 39641988 ~ 39671377 (-) | True | LOC110533865 |
| LOC110533866 | mRNA | upstream | 70362 | 39671573 ~ 39748431 (-) | True | LOC110533866 |
| XM_021618429.2 | mRNA | upstream | 170079 | 39771290 ~ 39775768 (-) | False | LOC110533869 |
| TU1009518 | other | downstream | 382827 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1009059 | other | downstream | 415071 | 39183698 ~ 39185494 (-) | True | rpl36a |
| TU1007856 | other | downstream | 1360006 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1007025 | other | downstream | 1896779 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1006746 | other | downstream | 2281701 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1010435 | other | upstream | 253755 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1010822 | other | upstream | 895503 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1012917 | other | upstream | 2381490 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1012952 | other | upstream | 2386500 | 41987711 ~ 41989801 (-) | False | G890385 |
| TU1012992 | other | upstream | 2475530 | 42076741 ~ 42077947 (-) | True | G890403 |
