Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1009500 |
| length | 232 |
| lncRNA type | antisense_over |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G887311 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39731617 ~ 39731848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1009474 | lncRNA | upstream | 33631 | 39697487 ~ 39697986 (+) | True | G887287 |
| TU1009462 | lncRNA | upstream | 50845 | 39678929 ~ 39680772 (+) | True | G887275 |
| TU1009451 | lncRNA | upstream | 53170 | 39677717 ~ 39678447 (+) | True | G887265 |
| TU1009460 | lncRNA | upstream | 55339 | 39671707 ~ 39676278 (+) | True | G887274 |
| TU1009432 | lncRNA | upstream | 90282 | 39641125 ~ 39641335 (+) | True | G887250 |
| TU1009829 | lncRNA | downstream | 26226 | 39758074 ~ 39805040 (+) | True | G887614 |
| TU1009841 | lncRNA | downstream | 39445 | 39771293 ~ 39772610 (+) | False | G887625 |
| TU1009845 | lncRNA | downstream | 39445 | 39771293 ~ 39776652 (+) | True | G887625 |
| TU1009853 | lncRNA | downstream | 51990 | 39783838 ~ 39801991 (+) | True | G887632 |
| TU1009890 | lncRNA | downstream | 102088 | 39833936 ~ 39834169 (+) | True | G887662 |
| XM_021618427.2 | mRNA | upstream | 21125 | 39707335 ~ 39710492 (+) | True | LOC110533867 |
| XM_021618428.2 | mRNA | upstream | 25038 | 39704518 ~ 39706579 (+) | True | LOC110533868 |
| XM_021618420.2 | mRNA | upstream | 497405 | 39227030 ~ 39234212 (+) | False | LOC110533863 |
| XM_021618421.2 | mRNA | upstream | 497405 | 39227358 ~ 39234212 (+) | True | LOC110533863 |
| XM_021618417.2 | mRNA | upstream | 546560 | 39157811 ~ 39185057 (+) | False | LOC110533860 |
| XR_005053662.1 | mRNA | downstream | 55853 | 39787701 ~ 39789535 (+) | True | LOC118966774 |
| XM_021617203.2 | mRNA | downstream | 243322 | 39975170 ~ 39977790 (+) | False | LOC110533109 |
| XM_036990257.1 | mRNA | downstream | 251194 | 39983042 ~ 40090027 (+) | False | LOC110533873 |
| XM_036990258.1 | mRNA | downstream | 251194 | 39983042 ~ 40090027 (+) | False | LOC110533873 |
| XM_036990262.1 | mRNA | downstream | 251194 | 39983042 ~ 40090027 (+) | False | LOC110533873 |
| TU1008492 | other | upstream | 919478 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1005877 | other | upstream | 2880464 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1005835 | other | upstream | 2930032 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005301 | other | upstream | 3436070 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 4045044 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1012334 | other | downstream | 1980479 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 1980479 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012336 | other | downstream | 1980479 | 41712327 ~ 41717292 (+) | True | G889906 |
| TU1012699 | other | downstream | 2346367 | 42078215 ~ 42153778 (+) | False | G890228 |
| TU1013804 | other | downstream | 3250834 | 42982682 ~ 43109676 (+) | True | G891133 |
