Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1010457 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G888141 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39837604 ~ 39837873 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1010401 | lncRNA | downstream | 3791 | 39833427 ~ 39833813 (-) | True | G888113 |
| TU1010400 | lncRNA | downstream | 7330 | 39797121 ~ 39830274 (-) | True | G888112 |
| TU1010399 | lncRNA | downstream | 41239 | 39795348 ~ 39796365 (-) | True | LOC118966773 |
| TU1009820 | lncRNA | downstream | 88266 | 39749058 ~ 39749338 (-) | True | G887606 |
| TU1009810 | lncRNA | downstream | 101802 | 39735599 ~ 39735802 (-) | True | G887596 |
| TU1010440 | lncRNA | upstream | 58981 | 39896854 ~ 39899447 (-) | True | G888135 |
| TU1010592 | lncRNA | upstream | 236117 | 40073990 ~ 40075124 (-) | True | G888272 |
| TU1010611 | lncRNA | upstream | 269337 | 40107210 ~ 40107587 (-) | True | G888286 |
| TU1010612 | lncRNA | upstream | 270069 | 40107942 ~ 40108218 (-) | True | G888287 |
| TU1010613 | lncRNA | upstream | 270552 | 40108425 ~ 40108708 (-) | True | G888288 |
| XM_036990249.1 | mRNA | downstream | 28968 | 39789877 ~ 39808636 (-) | True | LOC110533108 |
| XM_036990248.1 | mRNA | downstream | 39678 | 39789877 ~ 39797926 (-) | False | LOC110533108 |
| XR_005053661.1 | mRNA | downstream | 40998 | 39795776 ~ 39796606 (-) | False | LOC118966773 |
| XM_021618429.2 | mRNA | downstream | 61836 | 39771290 ~ 39775768 (-) | False | LOC110533869 |
| XM_021618430.2 | mRNA | downstream | 61836 | 39771290 ~ 39775768 (-) | True | LOC110533869 |
| XM_021618434.2 | mRNA | upstream | 5253 | 39843126 ~ 39893728 (-) | False | ksr1a |
| XM_021618436.2 | mRNA | upstream | 66299 | 39904172 ~ 39919322 (-) | False | LOC110533871 |
| XM_036990251.1 | mRNA | upstream | 66299 | 39904172 ~ 39919322 (-) | True | LOC110533871 |
| XM_021618437.2 | mRNA | upstream | 82888 | 39920761 ~ 39964811 (-) | False | LOC110533872 |
| XM_021618438.2 | mRNA | upstream | 82888 | 39920761 ~ 39964811 (-) | True | LOC110533872 |
| TU1009518 | other | downstream | 619866 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1009059 | other | downstream | 652110 | 39183698 ~ 39185494 (-) | True | rpl36a |
| TU1007856 | other | downstream | 1597045 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1007025 | other | downstream | 2133818 | 37598633 ~ 37703786 (-) | True | LOC110533823 |
| TU1006746 | other | downstream | 2518740 | 37316917 ~ 37318864 (-) | True | G884736 |
| TU1010435 | other | upstream | 17093 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1010822 | other | upstream | 658841 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1012917 | other | upstream | 2144828 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1012952 | other | upstream | 2149838 | 41987711 ~ 41989801 (-) | False | G890385 |
| TU1012992 | other | upstream | 2238868 | 42076741 ~ 42077947 (-) | True | G890403 |
