Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1011115 |
| length | 403 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G888756 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40779523 ~ 40779925 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1011111 | lncRNA | downstream | 3377 | 40775918 ~ 40776146 (-) | True | G888752 |
| TU1011077 | lncRNA | downstream | 31950 | 40747364 ~ 40747573 (-) | True | G888722 |
| TU1011055 | lncRNA | downstream | 47741 | 40730890 ~ 40731782 (-) | True | G888700 |
| TU1011040 | lncRNA | downstream | 55813 | 40723429 ~ 40723710 (-) | True | G888687 |
| TU1010965 | lncRNA | downstream | 124325 | 40654967 ~ 40655198 (-) | True | G888612 |
| TU1011116 | lncRNA | upstream | 2492 | 40782417 ~ 40782714 (-) | True | G888757 |
| TU1011614 | lncRNA | upstream | 10619 | 40790544 ~ 40790847 (-) | True | G889211 |
| TU1011616 | lncRNA | upstream | 13756 | 40793681 ~ 40793927 (-) | True | G889213 |
| TU1011617 | lncRNA | upstream | 14305 | 40794230 ~ 40794463 (-) | True | G889214 |
| TU1011628 | lncRNA | upstream | 28815 | 40808740 ~ 40809013 (-) | True | G889225 |
| XM_021618455.2 | mRNA | downstream | 139862 | 40631165 ~ 40639661 (-) | False | LOC110533881 |
| XM_021618456.2 | mRNA | downstream | 140264 | 40632245 ~ 40639259 (-) | True | LOC110533881 |
| XM_036990269.1 | mRNA | downstream | 232130 | 40496720 ~ 40547393 (-) | False | LOC110533878 |
| XM_021618458.2 | mRNA | upstream | 60177 | 40840102 ~ 40852716 (-) | False | LOC110533882 |
| XM_021618457.2 | mRNA | upstream | 60177 | 40840102 ~ 40852717 (-) | False | LOC110533882 |
| XM_036990281.1 | mRNA | upstream | 60177 | 40840102 ~ 40853480 (-) | False | LOC110533882 |
| XM_021618459.2 | mRNA | upstream | 63982 | 40843907 ~ 40852716 (-) | False | LOC110533882 |
| XM_021618460.2 | mRNA | upstream | 64037 | 40843962 ~ 40852716 (-) | False | LOC110533882 |
| TU1010822 | other | downstream | 232156 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1010435 | other | downstream | 885820 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1009518 | other | downstream | 1561785 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1009059 | other | downstream | 1594029 | 39183698 ~ 39185494 (-) | True | rpl36a |
| TU1007856 | other | downstream | 2538964 | 38238950 ~ 38240559 (-) | True | G885767 |
| TU1012917 | other | upstream | 1202776 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1012952 | other | upstream | 1207786 | 41987711 ~ 41989801 (-) | False | G890385 |
| TU1012992 | other | upstream | 1296816 | 42076741 ~ 42077947 (-) | True | G890403 |
| TU1014179 | other | upstream | 2279085 | 43059010 ~ 43070158 (-) | True | LOC110533946 |
| TU1014242 | other | upstream | 2413757 | 43193682 ~ 43247635 (-) | True | LOC110533954 |
