Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1011138 |
| length | 396 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G888779 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40810096 ~ 40810491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1011114 | lncRNA | upstream | 31261 | 40778555 ~ 40778835 (+) | True | G888755 |
| TU1011101 | lncRNA | upstream | 48966 | 40760849 ~ 40761130 (+) | True | G888742 |
| TU1011053 | lncRNA | upstream | 78951 | 40730898 ~ 40731145 (+) | True | G888698 |
| TU1011050 | lncRNA | upstream | 81133 | 40728704 ~ 40728963 (+) | True | G888695 |
| TU1010989 | lncRNA | upstream | 112423 | 40697384 ~ 40697673 (+) | True | G888636 |
| TU1011149 | lncRNA | downstream | 21730 | 40832221 ~ 40832487 (+) | True | G888789 |
| TU1011169 | lncRNA | downstream | 98260 | 40908751 ~ 40909981 (+) | True | LOC110533885 |
| TU1011191 | lncRNA | downstream | 131664 | 40942155 ~ 40942424 (+) | True | G888821 |
| TU1011270 | lncRNA | downstream | 249500 | 41059991 ~ 41060228 (+) | True | G888897 |
| TU1011277 | lncRNA | downstream | 259610 | 41070101 ~ 41070332 (+) | True | G888904 |
| XM_021618452.2 | mRNA | upstream | 314156 | 40479739 ~ 40495940 (+) | True | aatf |
| XM_021618454.2 | mRNA | upstream | 334301 | 40470019 ~ 40475795 (+) | False | LOC110533880 |
| XM_021618453.2 | mRNA | upstream | 334301 | 40470020 ~ 40475795 (+) | True | LOC110533880 |
| XM_021618450.2 | mRNA | upstream | 416442 | 40391376 ~ 40393654 (+) | True | LOC110533877 |
| XM_036990263.1 | mRNA | upstream | 431174 | 40366196 ~ 40378922 (+) | True | LOC110533875 |
| XM_021618461.2 | mRNA | downstream | 50860 | 40861351 ~ 40879099 (+) | True | LOC110533884 |
| XM_036990284.1 | mRNA | downstream | 70619 | 40881110 ~ 40909990 (+) | False | LOC110533885 |
| XM_036990283.1 | mRNA | downstream | 70620 | 40881111 ~ 40909990 (+) | False | LOC110533885 |
| XM_021618463.2 | mRNA | downstream | 70623 | 40881114 ~ 40909990 (+) | False | LOC110533885 |
| XM_036990286.1 | mRNA | downstream | 99636 | 40910127 ~ 40917500 (+) | False | LOC110533886 |
| TU1008492 | other | upstream | 1997957 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1005877 | other | upstream | 3958943 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1005835 | other | upstream | 4008511 | 36799385 ~ 36801585 (+) | True | LOC110533788 |
| TU1005301 | other | upstream | 4514549 | 36293314 ~ 36295547 (+) | False | G883473 |
| TU1004434 | other | upstream | 5123523 | 35682655 ~ 35686573 (+) | True | LOC110533748 |
| TU1012334 | other | downstream | 901836 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | downstream | 901836 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012336 | other | downstream | 901836 | 41712327 ~ 41717292 (+) | True | G889906 |
| TU1012699 | other | downstream | 1267724 | 42078215 ~ 42153778 (+) | False | G890228 |
| TU1013804 | other | downstream | 2172191 | 42982682 ~ 43109676 (+) | True | G891133 |
