Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1012981 |
| length | 403 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 4 |
| gene id | G890396 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42016679 ~ 42038846 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1012961 | lncRNA | downstream | 6223 | 42009979 ~ 42010456 (-) | True | G890393 |
| TU1012958 | lncRNA | downstream | 8792 | 42007687 ~ 42007887 (-) | True | G890390 |
| TU1012948 | lncRNA | downstream | 10223 | 42006009 ~ 42006456 (-) | True | LOC110533896 |
| TU1012953 | lncRNA | downstream | 26878 | 41988946 ~ 41989801 (-) | True | G890385 |
| TU1012950 | lncRNA | downstream | 37389 | 41979085 ~ 41979290 (-) | True | G890384 |
| TU1012979 | lncRNA | upstream | 10050 | 42032449 ~ 42038846 (-) | True | G890396 |
| TU1012985 | lncRNA | upstream | 30375 | 42052774 ~ 42062611 (-) | True | G890399 |
| TU1012987 | lncRNA | upstream | 48187 | 42070586 ~ 42070838 (-) | True | G890401 |
| TU1012995 | lncRNA | upstream | 65554 | 42087953 ~ 42089376 (-) | True | G890405 |
| TU1013042 | lncRNA | upstream | 132140 | 42154539 ~ 42154843 (-) | True | G890448 |
| XM_036989349.1 | mRNA | downstream | 4953 | 42004826 ~ 42011726 (-) | False | LOC110533896 |
| XM_021618481.2 | mRNA | downstream | 209799 | 41712311 ~ 41806880 (-) | False | LOC110533892 |
| XM_036990292.1 | mRNA | downstream | 209799 | 41786983 ~ 41806880 (-) | False | LOC110533892 |
| XM_021617205.2 | mRNA | downstream | 540700 | 41474987 ~ 41475979 (-) | True | LOC110533111 |
| XM_021618477.2 | mRNA | downstream | 574929 | 41256824 ~ 41441750 (-) | True | LOC110533890 |
| XR_002475184.2 | mRNA | upstream | 323317 | 42345716 ~ 42353693 (-) | False | LOC110534921 |
| XM_036990356.1 | mRNA | upstream | 522212 | 42544611 ~ 42553273 (-) | True | LOC118966777 |
| LOC110533933 | mRNA | upstream | 552374 | 42574773 ~ 42583308 (-) | True | LOC110533933 |
| XM_036934573.1 | mRNA | upstream | 567182 | 42589581 ~ 42593111 (-) | True | LOC110534922 |
| XM_021618523.2 | mRNA | upstream | 586188 | 42608587 ~ 42616547 (-) | True | LOC110533934 |
| TU1012952 | other | downstream | 26878 | 41987711 ~ 41989801 (-) | False | G890385 |
| TU1012917 | other | downstream | 32262 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1010822 | other | downstream | 1469312 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1010435 | other | downstream | 2122976 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1009518 | other | downstream | 2798941 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1012992 | other | upstream | 54342 | 42076741 ~ 42077947 (-) | True | G890403 |
| TU1014179 | other | upstream | 1036611 | 43059010 ~ 43070158 (-) | True | LOC110533946 |
| TU1014242 | other | upstream | 1171283 | 43193682 ~ 43247635 (-) | True | LOC110533954 |
| TU1015844 | other | upstream | 1661175 | 43683574 ~ 43683920 (-) | True | LOC110533962 |
| TU1015858 | other | upstream | 1688086 | 43710485 ~ 43710969 (-) | True | G892965 |
