Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1012987 |
| length | 253 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G890401 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42070586 ~ 42070838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1012985 | lncRNA | downstream | 7975 | 42052774 ~ 42062611 (-) | True | G890399 |
| TU1012979 | lncRNA | downstream | 31740 | 42032449 ~ 42038846 (-) | True | G890396 |
| TU1012983 | lncRNA | downstream | 44873 | 42017592 ~ 42025713 (-) | True | G890397 |
| TU1012975 | lncRNA | downstream | 46278 | 42016679 ~ 42024308 (-) | False | G890396 |
| TU1012973 | lncRNA | downstream | 48187 | 42016679 ~ 42022399 (-) | False | G890396 |
| TU1012995 | lncRNA | upstream | 17115 | 42087953 ~ 42089376 (-) | True | G890405 |
| TU1013042 | lncRNA | upstream | 83701 | 42154539 ~ 42154843 (-) | True | G890448 |
| TU1013044 | lncRNA | upstream | 87365 | 42158203 ~ 42158495 (-) | True | G890450 |
| TU1013050 | lncRNA | upstream | 205944 | 42276782 ~ 42291152 (-) | True | G890455 |
| TU1013122 | lncRNA | upstream | 241967 | 42312805 ~ 42313012 (-) | True | G890523 |
| XM_036989349.1 | mRNA | downstream | 58860 | 42004826 ~ 42011726 (-) | False | LOC110533896 |
| XM_021618481.2 | mRNA | downstream | 263706 | 41712311 ~ 41806880 (-) | False | LOC110533892 |
| XM_036990292.1 | mRNA | downstream | 263706 | 41786983 ~ 41806880 (-) | False | LOC110533892 |
| XM_021617205.2 | mRNA | downstream | 594607 | 41474987 ~ 41475979 (-) | True | LOC110533111 |
| XM_021618477.2 | mRNA | downstream | 628836 | 41256824 ~ 41441750 (-) | True | LOC110533890 |
| XR_002475184.2 | mRNA | upstream | 274878 | 42345716 ~ 42353693 (-) | False | LOC110534921 |
| XM_036990356.1 | mRNA | upstream | 473773 | 42544611 ~ 42553273 (-) | True | LOC118966777 |
| LOC110533933 | mRNA | upstream | 503935 | 42574773 ~ 42583308 (-) | True | LOC110533933 |
| XM_036934573.1 | mRNA | upstream | 518743 | 42589581 ~ 42593111 (-) | True | LOC110534922 |
| XM_021618523.2 | mRNA | upstream | 537749 | 42608587 ~ 42616547 (-) | True | LOC110533934 |
| TU1012952 | other | downstream | 80785 | 41987711 ~ 41989801 (-) | False | G890385 |
| TU1012917 | other | downstream | 86169 | 41982701 ~ 41984417 (-) | True | G890360 |
| TU1010822 | other | downstream | 1523219 | 40496714 ~ 40547367 (-) | True | LOC110533878 |
| TU1010435 | other | downstream | 2176883 | 39854966 ~ 39893703 (-) | True | ksr1a |
| TU1009518 | other | downstream | 2852848 | 39217313 ~ 39217738 (-) | True | G887329 |
| TU1012992 | other | upstream | 5903 | 42076741 ~ 42077947 (-) | True | G890403 |
| TU1014179 | other | upstream | 988172 | 43059010 ~ 43070158 (-) | True | LOC110533946 |
| TU1014242 | other | upstream | 1122844 | 43193682 ~ 43247635 (-) | True | LOC110533954 |
| TU1015844 | other | upstream | 1612736 | 43683574 ~ 43683920 (-) | True | LOC110533962 |
| TU1015858 | other | upstream | 1639647 | 43710485 ~ 43710969 (-) | True | G892965 |
