Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1012704 |
| length | 4554 |
| lncRNA type | read_through |
| GC content | 0.46 |
| exon number | 5 |
| gene id | G890228 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 42078215 ~ 42154093 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
42,040,000
42,050,000
42,060,000
42,070,000
42,080,000
42,090,000
42,100,000
42,110,000
42,120,000
42,130,000
42,140,000
42,150,000
42,160,000
42,170,000
NC_048574.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1012648 | lncRNA | upstream | 66516 | 42016405 ~ 42024310 (+) | True | G890203 |
| TU1012652 | lncRNA | upstream | 66858 | 42020758 ~ 42023968 (+) | True | G890205 |
| TU1012646 | lncRNA | upstream | 75419 | 42015207 ~ 42015407 (+) | True | G890201 |
| TU1012644 | lncRNA | upstream | 77028 | 42013506 ~ 42013798 (+) | True | G890199 |
| TU1012640 | lncRNA | upstream | 81166 | 42009439 ~ 42009660 (+) | True | G890195 |
| TU1012874 | lncRNA | downstream | 180531 | 42334309 ~ 42334516 (+) | True | G890318 |
| TU1012882 | lncRNA | downstream | 190125 | 42343903 ~ 42344109 (+) | True | G890325 |
| TU1013160 | lncRNA | downstream | 205770 | 42359548 ~ 42359769 (+) | True | G890560 |
| TU1013167 | lncRNA | downstream | 212036 | 42365814 ~ 42367662 (+) | True | G890564 |
| TU1013193 | lncRNA | downstream | 237882 | 42391660 ~ 42392017 (+) | True | G890583 |
| XM_021618502.2 | mRNA | upstream | 5071 | 42079542 ~ 42085755 (+) | True | LOC110533908 |
| XM_021618489.2 | mRNA | upstream | 12864 | 42070963 ~ 42077962 (+) | False | LOC110533897 |
| XM_021618490.2 | mRNA | upstream | 12864 | 42070963 ~ 42077962 (+) | False | LOC110533897 |
| XM_021618491.2 | mRNA | upstream | 12864 | 42070964 ~ 42077962 (+) | False | LOC110533897 |
| XM_036990348.1 | mRNA | upstream | 12864 | 42070964 ~ 42077962 (+) | True | LOC110533897 |
| XM_036990316.1 | mRNA | downstream | 11836 | 42165614 ~ 42306016 (+) | False | LOC110533900 |
| XM_036990334.1 | mRNA | downstream | 11836 | 42165614 ~ 42306016 (+) | False | LOC110533900 |
| XM_036990347.1 | mRNA | downstream | 11836 | 42165614 ~ 42306016 (+) | False | LOC110533900 |
| XM_036990349.1 | mRNA | downstream | 14876 | 42168654 ~ 42171430 (+) | True | LOC118966776 |
| XM_036990299.1 | mRNA | downstream | 19898 | 42173676 ~ 42306016 (+) | False | LOC110533900 |
| TU1012334 | other | upstream | 373534 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012335 | other | upstream | 373534 | 41712327 ~ 41717292 (+) | False | G889906 |
| TU1012336 | other | upstream | 373534 | 41712327 ~ 41717292 (+) | True | G889906 |
| TU1008492 | other | upstream | 3278687 | 38755509 ~ 38812139 (+) | True | LOC110533845 |
| TU1005877 | other | upstream | 5239673 | 36849646 ~ 36851153 (+) | True | G883966 |
| TU1013804 | other | downstream | 828904 | 42982682 ~ 43109676 (+) | True | G891133 |
| TU1013875 | other | downstream | 942942 | 43096720 ~ 43097617 (+) | True | G891188 |
| TU1014469 | other | downstream | 1380538 | 43534316 ~ 43535705 (+) | False | G891741 |
| TU1014470 | other | downstream | 1380538 | 43534316 ~ 43600230 (+) | True | G891741 |
| TU1014468 | other | downstream | 1388688 | 43542466 ~ 43555517 (+) | True | G891740 |
