Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1020898 |
| length | 277 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G897337 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 48880864 ~ 48881140 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1020897 | lncRNA | upstream | 101 | 48880547 ~ 48880763 (+) | True | G897336 |
| TU1020885 | lncRNA | upstream | 42185 | 48837716 ~ 48838679 (+) | False | LOC118936702 |
| TU1020886 | lncRNA | upstream | 42185 | 48837762 ~ 48838679 (+) | True | LOC118936702 |
| TU1020795 | lncRNA | upstream | 212757 | 48666776 ~ 48668107 (+) | True | G897237 |
| TU1020764 | lncRNA | upstream | 258891 | 48596351 ~ 48621973 (+) | True | G897207 |
| TU1020926 | lncRNA | downstream | 56498 | 48937638 ~ 48964172 (+) | True | G897362 |
| TU1021295 | lncRNA | downstream | 119012 | 49000152 ~ 49000627 (+) | True | G897689 |
| TU1021296 | lncRNA | downstream | 121890 | 49003030 ~ 49003245 (+) | True | G897690 |
| TU1021371 | lncRNA | downstream | 232181 | 49113321 ~ 49115378 (+) | True | G897764 |
| TU1021384 | lncRNA | downstream | 250720 | 49131860 ~ 49132088 (+) | True | G897776 |
| XM_021618877.2 | mRNA | upstream | 24932 | 48840604 ~ 48855932 (+) | True | LOC110534170 |
| XM_036933288.1 | mRNA | upstream | 40580 | 48805025 ~ 48840284 (+) | False | chm |
| XM_036933289.1 | mRNA | upstream | 40580 | 48805025 ~ 48840284 (+) | True | chm |
| XM_036933291.1 | mRNA | upstream | 42043 | 48837072 ~ 48838821 (+) | False | LOC118936702 |
| XM_021618872.2 | mRNA | upstream | 256463 | 48587286 ~ 48624401 (+) | True | LOC110534166 |
| NM_001160516.1 | mRNA | downstream | 30246 | 48911386 ~ 48927265 (+) | True | rtn3 |
| XM_021618886.2 | mRNA | downstream | 64523 | 48945663 ~ 48955133 (+) | False | LOC110534173 |
| XM_036933292.1 | mRNA | downstream | 64523 | 48945663 ~ 48955133 (+) | True | LOC110534173 |
| XM_021618887.2 | mRNA | downstream | 98392 | 48979532 ~ 48980528 (+) | True | LOC110534174 |
| XM_021618888.2 | mRNA | downstream | 107199 | 48988339 ~ 48993933 (+) | True | LOC110534176 |
| TU1020802 | other | upstream | 203799 | 48676257 ~ 48677065 (+) | True | G897244 |
| TU1019687 | other | upstream | 645248 | 48235182 ~ 48235616 (+) | True | G896217 |
| TU1019490 | other | upstream | 969889 | 47909716 ~ 47910975 (+) | True | G896043 |
| TU1019031 | other | upstream | 1663793 | 47216407 ~ 47217071 (+) | True | G895658 |
| TU1019025 | other | upstream | 1676022 | 47203246 ~ 47204842 (+) | True | G895652 |
| TU1021453 | other | downstream | 396562 | 49277702 ~ 49281952 (+) | False | LOC110534184 |
| TU1021565 | other | downstream | 549259 | 49430399 ~ 49432958 (+) | True | LOC110534189 |
| TU1022627 | other | downstream | 1153850 | 50034990 ~ 50037685 (+) | True | G898894 |
| TU1025780 | other | downstream | 3569078 | 52450218 ~ 52475365 (+) | True | G901849 |
| TU1025781 | other | downstream | 3651588 | 52532728 ~ 52535650 (+) | True | LOC110534253 |
