Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1021295 |
| length | 476 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G897689 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 49000152 ~ 49000627 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1020926 | lncRNA | upstream | 35980 | 48937638 ~ 48964172 (+) | True | G897362 |
| TU1020898 | lncRNA | upstream | 119012 | 48880864 ~ 48881140 (+) | True | G897337 |
| TU1020897 | lncRNA | upstream | 119389 | 48880547 ~ 48880763 (+) | True | G897336 |
| TU1020885 | lncRNA | upstream | 161473 | 48837716 ~ 48838679 (+) | False | LOC118936702 |
| TU1020886 | lncRNA | upstream | 161473 | 48837762 ~ 48838679 (+) | True | LOC118936702 |
| TU1021296 | lncRNA | downstream | 2403 | 49003030 ~ 49003245 (+) | True | G897690 |
| TU1021371 | lncRNA | downstream | 112694 | 49113321 ~ 49115378 (+) | True | G897764 |
| TU1021384 | lncRNA | downstream | 131233 | 49131860 ~ 49132088 (+) | True | G897776 |
| TU1021386 | lncRNA | downstream | 134734 | 49135361 ~ 49135561 (+) | True | G897778 |
| TU1021390 | lncRNA | downstream | 137638 | 49138265 ~ 49140071 (+) | False | G897780 |
| XM_021618888.2 | mRNA | upstream | 6219 | 48988339 ~ 48993933 (+) | True | LOC110534176 |
| XM_021618887.2 | mRNA | upstream | 19624 | 48979532 ~ 48980528 (+) | True | LOC110534174 |
| XM_021618886.2 | mRNA | upstream | 45019 | 48945663 ~ 48955133 (+) | False | LOC110534173 |
| XM_036933292.1 | mRNA | upstream | 45019 | 48945663 ~ 48955133 (+) | True | LOC110534173 |
| NM_001160516.1 | mRNA | upstream | 72887 | 48911386 ~ 48927265 (+) | True | rtn3 |
| XM_036933294.1 | mRNA | downstream | 28936 | 49029563 ~ 49103820 (+) | False | LOC110534177 |
| XM_036933295.1 | mRNA | downstream | 28936 | 49029563 ~ 49103820 (+) | True | LOC110534177 |
| XM_021618890.2 | mRNA | downstream | 160003 | 49160630 ~ 49181760 (+) | False | LOC110534178 |
| XM_021618892.2 | mRNA | downstream | 160003 | 49160630 ~ 49181760 (+) | True | LOC110534178 |
| XM_021618894.2 | mRNA | downstream | 189316 | 49189943 ~ 49212130 (+) | False | LOC110534179 |
| TU1020802 | other | upstream | 323087 | 48676257 ~ 48677065 (+) | True | G897244 |
| TU1019687 | other | upstream | 764536 | 48235182 ~ 48235616 (+) | True | G896217 |
| TU1019490 | other | upstream | 1089177 | 47909716 ~ 47910975 (+) | True | G896043 |
| TU1019031 | other | upstream | 1783081 | 47216407 ~ 47217071 (+) | True | G895658 |
| TU1019025 | other | upstream | 1795310 | 47203246 ~ 47204842 (+) | True | G895652 |
| TU1021453 | other | downstream | 277075 | 49277702 ~ 49281952 (+) | False | LOC110534184 |
| TU1021565 | other | downstream | 429772 | 49430399 ~ 49432958 (+) | True | LOC110534189 |
| TU1022627 | other | downstream | 1034363 | 50034990 ~ 50037685 (+) | True | G898894 |
| TU1025780 | other | downstream | 3449591 | 52450218 ~ 52475365 (+) | True | G901849 |
| TU1025781 | other | downstream | 3532101 | 52532728 ~ 52535650 (+) | True | LOC110534253 |
