Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1027004 |
| length | 4692 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G902840 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 53670120 ~ 53674811 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
53,663,000
53,664,000
53,665,000
53,666,000
53,667,000
53,668,000
53,669,000
53,670,000
53,671,000
53,672,000
53,673,000
53,674,000
53,675,000
53,676,000
NC_048574.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1027001 | lncRNA | upstream | 4851 | 53665038 ~ 53665269 (+) | True | G902837 |
| TU1026998 | lncRNA | upstream | 6405 | 53663461 ~ 53663715 (+) | True | G902834 |
| TU1026995 | lncRNA | upstream | 9123 | 53660792 ~ 53660997 (+) | True | G902831 |
| TU1026970 | lncRNA | upstream | 15282 | 53652494 ~ 53654838 (+) | True | G902808 |
| TU1026964 | lncRNA | upstream | 58147 | 53611694 ~ 53611973 (+) | True | G902802 |
| TU1027005 | lncRNA | downstream | 3218 | 53678029 ~ 53678388 (+) | True | G902841 |
| TU1027011 | lncRNA | downstream | 13118 | 53687929 ~ 53688231 (+) | True | G902847 |
| TU1026974 | lncRNA | downstream | 65101 | 53739912 ~ 53741201 (+) | True | LOC110534278 |
| TU1027043 | lncRNA | downstream | 99242 | 53774053 ~ 53774928 (+) | True | G902879 |
| TU1027045 | lncRNA | downstream | 104425 | 53779236 ~ 53779459 (+) | True | G902881 |
| XM_021619040.2 | mRNA | upstream | 22409 | 53615925 ~ 53647711 (+) | True | LOC110534276 |
| XM_021619035.2 | mRNA | upstream | 69853 | 53561543 ~ 53600267 (+) | True | LOC110534273 |
| XM_021619034.2 | mRNA | upstream | 116117 | 53522853 ~ 53554003 (+) | True | LOC110534272 |
| XM_021619031.2 | mRNA | upstream | 169337 | 53495704 ~ 53500783 (+) | False | LOC110534270 |
| XM_021619041.2 | mRNA | downstream | 33571 | 53708382 ~ 53718910 (+) | True | LOC110534277 |
| XM_036933371.1 | mRNA | downstream | 44795 | 53719606 ~ 53741239 (+) | False | LOC110534278 |
| XM_036933373.1 | mRNA | downstream | 44797 | 53719608 ~ 53741239 (+) | False | LOC110534278 |
| XM_036933374.1 | mRNA | downstream | 44797 | 53719608 ~ 53741239 (+) | False | LOC110534278 |
| XM_036933369.1 | mRNA | downstream | 44798 | 53719609 ~ 53741239 (+) | False | LOC110534278 |
| TU1026857 | other | upstream | 150332 | 53516107 ~ 53519788 (+) | False | G902707 |
| TU1025781 | other | upstream | 1134470 | 52532728 ~ 52535650 (+) | True | LOC110534253 |
| TU1025780 | other | upstream | 1194755 | 52450218 ~ 52475365 (+) | True | G901849 |
| TU1022627 | other | upstream | 3632435 | 50034990 ~ 50037685 (+) | True | G898894 |
| TU1021565 | other | upstream | 4237162 | 49430399 ~ 49432958 (+) | True | LOC110534189 |
| TU1027123 | other | downstream | 302620 | 53977431 ~ 53979255 (+) | False | helt |
| TU1027136 | other | downstream | 302620 | 53977431 ~ 53979272 (+) | True | helt |
| TU1029001 | other | downstream | 1556088 | 55230899 ~ 55231255 (+) | True | G904621 |
| TU1029052 | other | downstream | 1620426 | 55295237 ~ 55296054 (+) | True | G904663 |
| TU1031101 | other | downstream | 2981488 | 56656299 ~ 56656552 (+) | True | G906606 |
