RNA id: TU1051019



Basic Information


Item Value
RNA id TU1051019
length 426
lncRNA type read_through
GC content 0.36
exon number 2
gene id G924001
representative True

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73453871 ~ 73464356 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tttttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactggtattaaccatgaaatctgactgtttttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactagtattaaccatgatatctgattgtgtttaaccctgtaggtactggtattaaccatgatatctgactgtttttaaccctgtaggtactagtattaaccatgatatctgattgtgtttaaccctgtaggtactggtattaacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1050900 lncRNA downstream 13443 73345827 ~ 73440428 (-) False G923929
TU1051013 lncRNA downstream 14867 73438687 ~ 73439004 (-) True G923995
TU1050989 lncRNA downstream 38254 73415208 ~ 73415617 (-) True G923981
TU1050985 lncRNA downstream 41033 73412362 ~ 73412838 (-) True G923979
TU1050960 lncRNA downstream 53620 73391333 ~ 73400251 (-) True G923972
TU1050925 lncRNA upstream 32 73464388 ~ 73467825 (-) True G923944
TU1051021 lncRNA upstream 2957 73467313 ~ 73467641 (-) True G924003
TU1051033 lncRNA upstream 41747 73506103 ~ 73510193 (-) True G924015
TU1050941 lncRNA upstream 46392 73510748 ~ 73514124 (-) True G923957
TU1050902 lncRNA upstream 61207 73525563 ~ 73537582 (-) False G923929
XM_036933942.1 mRNA downstream 6982 73443953 ~ 73446889 (-) True LOC110534778
XM_036933931.1 mRNA downstream 80293 73370304 ~ 73373578 (-) True LOC110534783
XM_036933932.1 mRNA downstream 91371 73361183 ~ 73362500 (-) False LOC118936751
LOC110534807 mRNA downstream 105706 73320770 ~ 73348165 (-) True LOC110534807
XR_005034227.1 mRNA downstream 105972 73345935 ~ 73347899 (-) True LOC110533212
XM_036933950.1 mRNA upstream 33289 73497645 ~ 73502828 (-) False LOC118936757
XM_036933951.1 mRNA upstream 33289 73497645 ~ 73502828 (-) True LOC118936757
XM_036933954.1 mRNA upstream 58468 73522824 ~ 73524086 (-) True LOC118936759
XM_036933949.1 mRNA upstream 87709 73552065 ~ 73556782 (-) True LOC118936756
XM_036989385.1 mRNA upstream 102488 73566844 ~ 73569454 (-) True LOC118966650
TU1049957 other downstream 528137 72905577 ~ 72925734 (-) False G923192
TU1049956 other downstream 547579 72905577 ~ 72906292 (-) False G923192
TU1049088 other downstream 1689951 71762461 ~ 71763920 (-) True LOC110514144
TU1049077 other downstream 1705987 71745815 ~ 71747884 (-) False LOC110534950
TU1049024 other downstream 1790737 71661775 ~ 71663134 (-) True LOC118936746
TU1051061 other upstream 165786 73630142 ~ 73631970 (-) True G924041
TU1052402 other upstream 1452821 74917177 ~ 74918259 (-) True LOC110517287
TU1052404 other upstream 1473549 74937905 ~ 74938357 (-) True LOC118966654
TU1052259 other upstream 1588760 75053116 ~ 75054381 (-) True LOC118936366
TU1052546 other upstream 1819635 75283991 ~ 75284673 (-) True G925211

Expression Profile