Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1055424 |
| length | 558 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 3 |
| gene id | G927407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 78612505 ~ 78613629 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1055422 | lncRNA | downstream | 5422 | 78606679 ~ 78607083 (-) | True | G927406 |
| TU1055416 | lncRNA | downstream | 25950 | 78586072 ~ 78586555 (-) | True | G927400 |
| TU1055413 | lncRNA | downstream | 29741 | 78582531 ~ 78582764 (-) | True | G927397 |
| TU1055396 | lncRNA | downstream | 71614 | 78540598 ~ 78540891 (-) | True | G927382 |
| TU1055395 | lncRNA | downstream | 72314 | 78539753 ~ 78540191 (-) | True | LOC110497253 |
| TU1055428 | lncRNA | upstream | 1850 | 78615479 ~ 78682974 (-) | True | G927408 |
| TU1055387 | lncRNA | upstream | 87661 | 78701290 ~ 78712775 (-) | True | G927373 |
| TU1055454 | lncRNA | upstream | 100021 | 78713650 ~ 78714223 (-) | True | G927433 |
| TU1055391 | lncRNA | upstream | 190150 | 78803779 ~ 78804351 (-) | True | LOC118936786 |
| TU1055495 | lncRNA | upstream | 201863 | 78815492 ~ 78860585 (-) | True | G927464 |
| XM_036934080.1 | mRNA | downstream | 3162 | 78604045 ~ 78609343 (-) | True | LOC118936784 |
| XM_036934079.1 | mRNA | downstream | 13492 | 78593433 ~ 78599013 (-) | True | LOC110497254 |
| XM_036934078.1 | mRNA | downstream | 13521 | 78593433 ~ 78598984 (-) | False | LOC110497254 |
| NM_001124461.1 | mRNA | downstream | 43140 | 78546745 ~ 78569365 (-) | True | LOC100136185 |
| XM_036989318.1 | mRNA | downstream | 48054 | 78546737 ~ 78564451 (-) | False | LOC100136185 |
| XM_036934081.1 | mRNA | upstream | 82775 | 78696404 ~ 78712050 (-) | False | LOC110497244 |
| XM_036934082.1 | mRNA | upstream | 82775 | 78696404 ~ 78750918 (-) | False | LOC110497244 |
| XM_036934083.1 | mRNA | upstream | 124102 | 78737731 ~ 78750893 (-) | False | LOC110497244 |
| XM_036934084.1 | mRNA | upstream | 124102 | 78737731 ~ 78750899 (-) | True | LOC110497244 |
| XR_005034238.1 | mRNA | upstream | 142231 | 78755860 ~ 78756740 (-) | True | LOC118936785 |
| TU1055345 | other | downstream | 102574 | 78507077 ~ 78509931 (-) | True | LOC110497238 |
| TU1055177 | other | downstream | 138446 | 78467432 ~ 78474059 (-) | True | LOC110497224 |
| TU1055178 | other | downstream | 167364 | 78442928 ~ 78445141 (-) | True | LOC110497241 |
| TU1055181 | other | downstream | 170523 | 78441305 ~ 78441982 (-) | True | G927222 |
| TU1055320 | other | downstream | 178409 | 78429835 ~ 78434096 (-) | True | G927317 |
| TU1055750 | other | upstream | 604886 | 79218515 ~ 79222867 (-) | False | G927654 |
| TU1055751 | other | upstream | 604886 | 79218515 ~ 79222867 (-) | True | G927654 |
| TU1055754 | other | upstream | 617542 | 79231171 ~ 79231580 (-) | True | LOC110511089 |
| TU1055775 | other | upstream | 661064 | 79274693 ~ 79281790 (-) | True | G927673 |
| TU1056065 | other | upstream | 758487 | 79372116 ~ 79372872 (-) | True | G927893 |
