Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1056514 |
| length | 728 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G928200 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 80023496 ~ 80024223 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1056497 | lncRNA | downstream | 11942 | 79995682 ~ 80011554 (-) | True | G928185 |
| TU1056496 | lncRNA | downstream | 16104 | 79995682 ~ 80007392 (-) | False | G928185 |
| TU1056494 | lncRNA | downstream | 16181 | 80005126 ~ 80007315 (-) | True | G928184 |
| TU1056472 | lncRNA | downstream | 39280 | 79983990 ~ 79984216 (-) | True | G928168 |
| TU1056466 | lncRNA | downstream | 43663 | 79979133 ~ 79979833 (-) | True | G928162 |
| TU1056517 | lncRNA | upstream | 79 | 80024302 ~ 80024779 (-) | True | G928203 |
| TU1056518 | lncRNA | upstream | 586 | 80024809 ~ 80025608 (-) | True | G928204 |
| TU1056531 | lncRNA | upstream | 4585 | 80028808 ~ 80029987 (-) | True | G928208 |
| TU1056537 | lncRNA | upstream | 11493 | 80035716 ~ 80035930 (-) | True | G928213 |
| TU1056540 | lncRNA | upstream | 33773 | 80057996 ~ 80058256 (-) | True | G928216 |
| XM_036934138.1 | mRNA | downstream | 220938 | 79786630 ~ 79802558 (-) | True | LOC110531688 |
| XM_036934139.1 | mRNA | downstream | 221081 | 79786630 ~ 79802415 (-) | False | LOC110531688 |
| XM_036934113.1 | mRNA | downstream | 692990 | 79291191 ~ 79330506 (-) | True | LOC118936793 |
| XM_036934112.1 | mRNA | downstream | 786327 | 79222288 ~ 79237169 (-) | False | LOC110511089 |
| XM_036934111.1 | mRNA | downstream | 801293 | 79212795 ~ 79222203 (-) | True | LOC110511088 |
| XR_005034364.1 | mRNA | upstream | 66339 | 80090562 ~ 80094309 (-) | True | LOC118936938 |
| XR_005034254.1 | mRNA | upstream | 118471 | 80142694 ~ 80145965 (-) | True | LOC118936799 |
| XR_005034255.1 | mRNA | upstream | 136390 | 80160613 ~ 80163884 (-) | True | LOC118936800 |
| XM_036934143.1 | mRNA | upstream | 220860 | 80245083 ~ 80295806 (-) | False | LOC110519670 |
| XR_005034256.1 | mRNA | upstream | 223892 | 80248115 ~ 80249110 (-) | True | LOC118936801 |
| TU1056215 | other | downstream | 435631 | 79586078 ~ 79587865 (-) | False | G927980 |
| TU1056216 | other | downstream | 435631 | 79586078 ~ 79587865 (-) | True | G927980 |
| TU1056168 | other | downstream | 465541 | 79555970 ~ 79557955 (-) | True | G927948 |
| TU1056065 | other | downstream | 650624 | 79372116 ~ 79372872 (-) | True | G927893 |
| TU1055775 | other | downstream | 741706 | 79274693 ~ 79281790 (-) | True | G927673 |
| TU1056972 | other | upstream | 580546 | 80604769 ~ 80610777 (-) | True | LOC110517091 |
| TU1057048 | other | upstream | 624153 | 80648376 ~ 80652202 (-) | False | G928558 |
| TU1057058 | other | upstream | 628769 | 80652992 ~ 80657416 (-) | True | LOC110516987 |
| TU1058435 | other | upstream | 699272 | 80723495 ~ 80724244 (-) | True | G929479 |
| TU1058446 | other | upstream | 723247 | 80747470 ~ 80747858 (-) | True | G929489 |
