RNA id: TU1057591


Basic Information

Item Value
RNA id TU1057591
length 248
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G928932
representative True

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81679392 ~ 81679639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gccttagaccactgaatcacagccttagaccactgaatcactgccttagaccactgaatcactgccttagaccactgaatcactgccttagaccactgaatcacagccttagaccactgaatcactgccttagaccactgaatcactgccttagaccactgaatcacagccttagaccactgaatcacagccttagaccactgaatcactgccttagaccactgaatcacagccttagaccactgaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1057570 lncRNA upstream 959 81677828 ~ 81678433 (+) True G928913
TU1057572 lncRNA upstream 22884 81655932 ~ 81656508 (+) True LOC118936819
TU1057582 lncRNA upstream 40237 81636942 ~ 81639155 (+) True G928924
TU1057581 lncRNA upstream 40833 81636668 ~ 81638559 (+) True G928923
TU1057579 lncRNA upstream 62196 81616974 ~ 81617196 (+) True G928921
TU1057609 lncRNA downstream 22904 81702543 ~ 81702826 (+) True G928947
TU1057610 lncRNA downstream 47829 81727468 ~ 81727673 (+) True G928948
TU1057595 lncRNA downstream 50458 81730097 ~ 81731678 (+) True LOC110514629
TU1057612 lncRNA downstream 54304 81733943 ~ 81734340 (+) True G928950
TU1057616 lncRNA downstream 67400 81747039 ~ 81747672 (+) True G928954
XM_036934194.1 mRNA upstream 7054 81617460 ~ 81672338 (+) False LOC118936819
XM_036934192.1 mRNA upstream 64063 81558744 ~ 81615329 (+) False LOC118936818
XM_036934193.1 mRNA upstream 64063 81558744 ~ 81615329 (+) False LOC118936818
XM_036934189.1 mRNA upstream 144401 81526514 ~ 81534991 (+) False LOC110513527
XR_005034268.1 mRNA downstream 2795 81682434 ~ 81685439 (+) False LOC118936820
XR_005034266.1 mRNA downstream 2797 81682436 ~ 81685439 (+) False LOC118936820
XR_005034269.1 mRNA downstream 2797 81682436 ~ 81685439 (+) False LOC118936820
XR_005034274.1 mRNA downstream 2797 81682436 ~ 81685439 (+) False LOC118936820
XR_005034265.1 mRNA downstream 2798 81682437 ~ 81685439 (+) False LOC118936820
TU1057571 other upstream 22884 81635738 ~ 81656508 (+) False LOC118936819
TU1057588 other upstream 25001 81653391 ~ 81654391 (+) True G928929
TU1057587 other upstream 25115 81653391 ~ 81654277 (+) False G928929
TU1057515 other upstream 83640 81595003 ~ 81595752 (+) False LOC118936818
TU1057514 other upstream 83655 81579385 ~ 81595737 (+) False LOC118936818
TU1057598 other downstream 41594 81721233 ~ 81722841 (+) False LOC110514629
TU1057735 other downstream 268471 81948110 ~ 81961513 (+) True G929033
TU1057775 other downstream 493826 82173465 ~ 82201005 (+) False LOC118936825
TU1057776 other downstream 493826 82173465 ~ 82201005 (+) False LOC118936825
TU1057850 other downstream 500147 82179786 ~ 82180426 (+) True G929113

Expression Profile