RNA id: TU1058185


Basic Information

Item Value
RNA id TU1058185
length 511
RNA type TUCP
GC content 0.53
exon number 2
gene id G929305
representative True

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82761605 ~ 82762488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tgtgtgtgtctgtgtgtgtatgtgtgtgtgtgtgtgtgtctctctgtgtgttgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctctgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgttcctctgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtaccgtaccCACGCTGGCCTTCAGGAACTTGCTGCCTATCCTCTGGTCCATGCCGATGGCTAGAGCCACCTCCTCTACGTCAGCCCCCGTTGACTCACACAGAGCACTGATACTGTTGATACTGCTGATACGCTGGGCTAGGAACGCATTggcagcctgacacacacacacacacacacacacacacagctccagtTATTCCCAGGAGACTGTAGTCAGacagcgacccccccccccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1058184 lncRNA upstream 548 82760491 ~ 82761057 (+) False G929304
TU1058183 lncRNA upstream 548 82760783 ~ 82761057 (+) True G929304
TU1058181 lncRNA upstream 12409 82748888 ~ 82749196 (+) True G929302
TU1058176 lncRNA upstream 15380 82741157 ~ 82746225 (+) False LOC118936830
TU1058173 lncRNA upstream 18825 82741157 ~ 82742780 (+) False LOC118936830
TU1058186 lncRNA downstream 2269 82764757 ~ 82765033 (+) True G929306
TU1058188 lncRNA downstream 4538 82767026 ~ 82767410 (+) True G929307
TU1058119 lncRNA downstream 11840 82774328 ~ 82775690 (+) True G929267
TU1058197 lncRNA downstream 50716 82813204 ~ 82813628 (+) True G929316
TU1058210 lncRNA downstream 77211 82839699 ~ 82840188 (+) True G929323
XR_005034283.1 mRNA upstream 19013 82741138 ~ 82742592 (+) False LOC118936830
XM_036934228.1 mRNA upstream 22935 82727415 ~ 82738670 (+) True LOC110512972
XM_036934225.1 mRNA upstream 360365 82316721 ~ 82401240 (+) False LOC118936828
XM_036934226.1 mRNA upstream 360365 82316721 ~ 82401240 (+) True LOC118936828
XM_036934223.1 mRNA upstream 369324 82316721 ~ 82392281 (+) False LOC118936828
XM_036934238.1 mRNA downstream 31165 82793653 ~ 82811450 (+) False LOC118936832
XM_036934240.1 mRNA downstream 31165 82793653 ~ 82811450 (+) False LOC118936832
XM_036934241.1 mRNA downstream 31165 82793653 ~ 82811450 (+) False LOC118936832
XM_036934237.1 mRNA downstream 31166 82793654 ~ 82811450 (+) False LOC118936832
XM_036934242.1 mRNA downstream 31167 82793655 ~ 82811450 (+) False LOC118936832
TU1058175 other upstream 18825 82741434 ~ 82742780 (+) False LOC118936830
TU1058178 other upstream 18825 82741434 ~ 82742780 (+) True LOC118936830
TU1057946 other upstream 452033 82308803 ~ 82309572 (+) False G929159
TU1057948 other upstream 452033 82308803 ~ 82309572 (+) True G929159
TU1057903 other upstream 457323 82291950 ~ 82304282 (+) False LOC118936827
TU1058109 other downstream 31021 82793509 ~ 82798322 (+) True LOC118936832
TU1058236 other downstream 153308 82915796 ~ 82919230 (+) False LOC110512617
TU1058232 other downstream 165237 82927725 ~ 82933167 (+) False LOC110512617
TU1058233 other downstream 165237 82927725 ~ 82931861 (+) False LOC110512617
TU1058227 other downstream 179306 82941794 ~ 82949168 (+) False LOC110512617

Expression Profile