RNA id: TU1058197


Basic Information

Item Value
RNA id TU1058197
length 249
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G929316
representative True

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82813204 ~ 82813628 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGTCTGGGTTACCTGCTGTAGTAACCTCCTGGAGGTCTGGGTTACCTCCTGTAGTAACCTCCTGGAGGTCTGGGTTACCTGCTGTCCACCCTTCCATCTCCTACTTCCAACCAAGATGCATGAATTGATGAGCAAACGGAAGTATTGGAGAATCGACTCTTGGTCTGAAGTATAACACAGTAAAGTAACGCATTACATCTACAAAGGATTTTATTTTCTGCTTAAAAATTAAATGTGAAAACCCATCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1058174 lncRNA upstream 32687 82740970 ~ 82780517 (+) False LOC118936830
TU1058119 lncRNA upstream 37514 82774328 ~ 82775690 (+) True G929267
TU1058188 lncRNA upstream 45794 82767026 ~ 82767410 (+) True G929307
TU1058186 lncRNA upstream 48171 82764757 ~ 82765033 (+) True G929306
TU1058184 lncRNA upstream 52147 82760491 ~ 82761057 (+) False G929304
TU1058210 lncRNA downstream 26071 82839699 ~ 82840188 (+) True G929323
TU1058220 lncRNA downstream 42579 82856207 ~ 82857225 (+) False G929328
TU1058221 lncRNA downstream 42579 82856207 ~ 82857225 (+) True G929328
TU1058244 lncRNA downstream 71112 82884740 ~ 82887716 (+) False G929341
TU1058245 lncRNA downstream 71112 82884740 ~ 82887420 (+) True G929341
XM_036934238.1 mRNA upstream 1754 82793653 ~ 82811450 (+) False LOC118936832
XM_036934240.1 mRNA upstream 1754 82793653 ~ 82811450 (+) False LOC118936832
XM_036934241.1 mRNA upstream 1754 82793653 ~ 82811450 (+) False LOC118936832
XM_036934237.1 mRNA upstream 1754 82793654 ~ 82811450 (+) False LOC118936832
XM_036934242.1 mRNA upstream 1754 82793655 ~ 82811450 (+) False LOC118936832
XM_036989409.1 mRNA downstream 92102 82905730 ~ 82955813 (+) False LOC110512617
XM_036934270.1 mRNA downstream 147443 82961071 ~ 82976330 (+) False LOC110515053
XM_036934267.1 mRNA downstream 147445 82961073 ~ 82976329 (+) False LOC110515053
XM_036934268.1 mRNA downstream 147445 82961073 ~ 82976329 (+) False LOC110515053
XR_005034285.1 mRNA downstream 147445 82961073 ~ 82976330 (+) False LOC110515053
TU1058109 other upstream 14882 82793509 ~ 82798322 (+) True LOC118936832
TU1058185 other upstream 50716 82761605 ~ 82762488 (+) True G929305
TU1058175 other upstream 70424 82741434 ~ 82742780 (+) False LOC118936830
TU1058178 other upstream 70424 82741434 ~ 82742780 (+) True LOC118936830
TU1057946 other upstream 503632 82308803 ~ 82309572 (+) False G929159
TU1058236 other downstream 102168 82915796 ~ 82919230 (+) False LOC110512617
TU1058232 other downstream 114097 82927725 ~ 82933167 (+) False LOC110512617
TU1058233 other downstream 114097 82927725 ~ 82931861 (+) False LOC110512617
TU1058227 other downstream 128166 82941794 ~ 82949168 (+) False LOC110512617
TU1058230 other downstream 128186 82941814 ~ 82949168 (+) False LOC110512617

Expression Profile