RNA id: TU1058244


Basic Information

Item Value
RNA id TU1058244
length 206
lncRNA type intronic
GC content 0.36
exon number 3
gene id G929341
representative False

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82884740 ~ 82887716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tatggttttataaagggtAATGTGCAGTATGGGTTATGGTTGTATAAAGGGTAATGTCCAGTATGGgttatggttttataaagggtaatgtccagtatgggttatggttttataaaggggtAATGTCCAGTATGGGTTATGGTTTTATAAAGGGTAATGGTTTTATAAAGGGTCATGTCCAGTAAGGGTCATGGTTTTATAAAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1058220 lncRNA upstream 27515 82856207 ~ 82857225 (+) False G929328
TU1058221 lncRNA upstream 27515 82856207 ~ 82857225 (+) True G929328
TU1058210 lncRNA upstream 44552 82839699 ~ 82840188 (+) True G929323
TU1058197 lncRNA upstream 71112 82813204 ~ 82813628 (+) True G929316
TU1058119 lncRNA upstream 109050 82774328 ~ 82775690 (+) True G929267
TU1058252 lncRNA downstream 64374 82952090 ~ 82952710 (+) True G929346
TU1058273 lncRNA downstream 91856 82979572 ~ 82980453 (+) True G929353
TU1058277 lncRNA downstream 97095 82984811 ~ 82985911 (+) True G929355
TU1058285 lncRNA downstream 116282 83003998 ~ 83004589 (+) True G929360
TU1058289 lncRNA downstream 124095 83011811 ~ 83012084 (+) True G929364
XM_036934240.1 mRNA upstream 73290 82793653 ~ 82811450 (+) False LOC118936832
XM_036989409.1 mRNA downstream 18014 82905730 ~ 82955813 (+) False LOC110512617
XM_036934270.1 mRNA downstream 73355 82961071 ~ 82976330 (+) False LOC110515053
XM_036934267.1 mRNA downstream 73357 82961073 ~ 82976329 (+) False LOC110515053
XM_036934268.1 mRNA downstream 73357 82961073 ~ 82976329 (+) False LOC110515053
XR_005034285.1 mRNA downstream 73357 82961073 ~ 82976330 (+) False LOC110515053
TU1058109 other upstream 86418 82793509 ~ 82798322 (+) True LOC118936832
TU1058185 other upstream 122252 82761605 ~ 82762488 (+) True G929305
TU1058175 other upstream 141960 82741434 ~ 82742780 (+) False LOC118936830
TU1058178 other upstream 141960 82741434 ~ 82742780 (+) True LOC118936830
TU1057948 other upstream 575168 82308803 ~ 82309572 (+) True G929159
TU1058236 other downstream 28080 82915796 ~ 82919230 (+) False LOC110512617
TU1058232 other downstream 40009 82927725 ~ 82933167 (+) False LOC110512617
TU1058233 other downstream 40009 82927725 ~ 82931861 (+) False LOC110512617
TU1058227 other downstream 54078 82941794 ~ 82949168 (+) False LOC110512617
TU1058230 other downstream 54098 82941814 ~ 82949168 (+) False LOC110512617

Expression Profile