Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1063971 |
| length | 1049 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | slc22a13b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 392112 ~ 438530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1064003 | lncRNA | upstream | 3539 | 432996 ~ 433447 (+) | True | G933274 |
| TU1063991 | lncRNA | upstream | 20499 | 409936 ~ 416487 (+) | True | G933262 |
| TU1063993 | lncRNA | upstream | 21582 | 413063 ~ 415404 (+) | True | G933264 |
| TU1063989 | lncRNA | upstream | 29030 | 407341 ~ 407956 (+) | True | G933261 |
| TU1063984 | lncRNA | upstream | 31450 | 403387 ~ 405536 (+) | True | G933258 |
| TU1064017 | lncRNA | downstream | 21316 | 459350 ~ 459708 (+) | True | G933287 |
| TU1064288 | lncRNA | downstream | 33515 | 471549 ~ 471782 (+) | True | G933520 |
| TU1064290 | lncRNA | downstream | 35282 | 473316 ~ 473542 (+) | True | G933522 |
| TU1064292 | lncRNA | downstream | 39560 | 477594 ~ 477935 (+) | True | G933524 |
| TU1064318 | lncRNA | downstream | 70015 | 508049 ~ 511773 (+) | True | G933545 |
| XM_036934643.1 | mRNA | upstream | 1527 | 392112 ~ 435459 (+) | False | slc22a13b |
| XM_036934640.1 | mRNA | upstream | 58623 | 340641 ~ 378363 (+) | True | cry-dash |
| XM_036934639.1 | mRNA | upstream | 129146 | 193431 ~ 307840 (+) | True | dlec1 |
| XM_036934638.1 | mRNA | upstream | 129147 | 193352 ~ 307839 (+) | False | dlec1 |
| XM_036934636.1 | mRNA | upstream | 348635 | 63442 ~ 88351 (+) | True | gars1 |
| XM_021620013.2 | mRNA | downstream | 47658 | 485692 ~ 542353 (+) | False | LOC110535152 |
| XM_036936628.1 | mRNA | downstream | 123400 | 561434 ~ 564576 (+) | True | LOC118937458 |
| XM_036934647.1 | mRNA | downstream | 137606 | 575640 ~ 604339 (+) | False | LOC110536523 |
| XM_021620012.2 | mRNA | downstream | 194089 | 632123 ~ 646961 (+) | True | LOC110535151 |
| XM_036934648.1 | mRNA | downstream | 304458 | 742492 ~ 859531 (+) | False | LOC110535150 |
| TU1064305 | other | downstream | 47796 | 485830 ~ 539412 (+) | True | LOC110535152 |
| TU1064302 | other | downstream | 123619 | 561653 ~ 562659 (+) | False | G933532 |
| TU1064300 | other | downstream | 123980 | 562014 ~ 562659 (+) | True | G933532 |
| TU1064355 | other | downstream | 158289 | 596323 ~ 604169 (+) | True | LOC110536523 |
| TU1064476 | other | downstream | 287153 | 725187 ~ 728205 (+) | True | G933679 |
