Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036934764.1 |
| length | 5579 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 11 |
| gene id | LOC110535213 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 8650438 ~ 8685656 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K10431 | MAP4; microtubule-associated protein 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1072515 | lncRNA | upstream | 34862 | 8612814 ~ 8615576 (+) | True | G940355 |
| TU1072510 | lncRNA | upstream | 42657 | 8607415 ~ 8607781 (+) | True | G940350 |
| TU1072448 | lncRNA | upstream | 76918 | 8513005 ~ 8573520 (+) | True | G940303 |
| TU1072424 | lncRNA | upstream | 143058 | 8502985 ~ 8507380 (+) | False | G940297 |
| TU1072420 | lncRNA | upstream | 143058 | 8504218 ~ 8507380 (+) | False | G940297 |
| TU1072568 | lncRNA | downstream | 16780 | 8702436 ~ 8736722 (+) | True | G940402 |
| TU1072543 | lncRNA | downstream | 25255 | 8710911 ~ 8743124 (+) | False | G940379 |
| TU1072541 | lncRNA | downstream | 27997 | 8713653 ~ 8743124 (+) | True | G940379 |
| TU1072544 | lncRNA | downstream | 102842 | 8788498 ~ 8788913 (+) | True | G940380 |
| TU1072548 | lncRNA | downstream | 116275 | 8801931 ~ 8802235 (+) | True | LOC110535219 |
| XM_036934763.1 | mRNA | upstream | 153418 | 8381370 ~ 8497020 (+) | False | LOC110536544 |
| XM_036936634.1 | mRNA | upstream | 312798 | 8294346 ~ 8337640 (+) | True | LOC118937462 |
| XM_021620079.2 | mRNA | upstream | 424400 | 8195607 ~ 8226038 (+) | False | LOC110535212 |
| XM_036936611.1 | mRNA | upstream | 474653 | 8174793 ~ 8175785 (+) | True | LOC118937436 |
| XR_005034786.1 | mRNA | upstream | 476413 | 8171872 ~ 8174025 (+) | True | LOC110536601 |
| XR_002475217.2 | mRNA | downstream | 113884 | 8799540 ~ 8802257 (+) | False | LOC110535219 |
| XR_005034543.1 | mRNA | downstream | 113884 | 8799540 ~ 8802257 (+) | False | LOC110535219 |
| LOC118937463 | mRNA | downstream | 159909 | 8845565 ~ 8855476 (+) | False | LOC118937463 |
| XM_021620091.2 | mRNA | downstream | 171450 | 8857106 ~ 8860218 (+) | True | LOC110535221 |
| NM_001124275.1 | mRNA | downstream | 183920 | 8869576 ~ 8880714 (+) | True | LOC100135908 |
| TU1072470 | other | upstream | 109571 | 8532540 ~ 8540867 (+) | True | G940313 |
| TU1072364 | other | upstream | 210663 | 8439480 ~ 8439775 (+) | True | G940247 |
| TU1072200 | other | upstream | 268858 | 8379847 ~ 8381580 (+) | False | LOC110536544 |
| TU1072090 | other | upstream | 271110 | 8196368 ~ 8379328 (+) | True | LOC110535212 |
| TU1072199 | other | upstream | 272510 | 8374506 ~ 8377928 (+) | True | G940102 |
| TU1072646 | other | downstream | 166838 | 8852494 ~ 8855437 (+) | True | LOC118937463 |
| TU1074217 | other | downstream | 1559453 | 10245109 ~ 10245506 (+) | True | G941893 |
| TU1075144 | other | downstream | 2425070 | 11110726 ~ 11111336 (+) | True | G942702 |
| TU1077607 | other | downstream | 4701894 | 13387550 ~ 13394875 (+) | True | G944957 |
| TU1079178 | other | downstream | 5378892 | 14064548 ~ 14065869 (+) | True | G946426 |
