Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001165190.1 |
| length | 1220 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | LOC100305285 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 9319032 ~ 9329583 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K23902 | PDCD6; programmed cell death protein 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1072770 | lncRNA | upstream | 16421 | 9297175 ~ 9302611 (+) | True | G940576 |
| TU1072767 | lncRNA | upstream | 16518 | 9297175 ~ 9302514 (+) | False | G940576 |
| TU1072781 | lncRNA | upstream | 37892 | 9280929 ~ 9281140 (+) | True | G940586 |
| TU1072774 | lncRNA | upstream | 48018 | 9270643 ~ 9271014 (+) | True | G940579 |
| TU1072765 | lncRNA | upstream | 54380 | 9262749 ~ 9264652 (+) | True | G940574 |
| TU1072830 | lncRNA | downstream | 37468 | 9367051 ~ 9381784 (+) | True | G940632 |
| TU1072816 | lncRNA | downstream | 72848 | 9402431 ~ 9405490 (+) | True | LOC110535239 |
| TU1072814 | lncRNA | downstream | 76721 | 9406304 ~ 9407558 (+) | True | G940618 |
| TU1072812 | lncRNA | downstream | 78242 | 9407825 ~ 9409672 (+) | True | G940616 |
| TU1072817 | lncRNA | downstream | 83606 | 9413189 ~ 9421918 (+) | True | G940620 |
| XM_036934807.1 | mRNA | upstream | 22073 | 9278925 ~ 9296959 (+) | False | LOC110535237 |
| XM_036934809.1 | mRNA | upstream | 22073 | 9284416 ~ 9296959 (+) | True | LOC110535237 |
| XR_005034814.1 | mRNA | upstream | 28168 | 9290727 ~ 9290864 (+) | True | LOC118937475 |
| XR_005034544.1 | mRNA | upstream | 342628 | 8972920 ~ 8976404 (+) | True | LOC118937300 |
| XM_036934770.1 | mRNA | upstream | 350547 | 8938355 ~ 8968485 (+) | False | LOC110535229 |
| XM_036934811.1 | mRNA | downstream | 27446 | 9357029 ~ 9405871 (+) | False | LOC110535239 |
| XR_005034552.1 | mRNA | downstream | 81295 | 9410878 ~ 9412277 (+) | True | LOC118937311 |
| XM_021620129.2 | mRNA | downstream | 842266 | 10171849 ~ 10175528 (+) | False | LOC110535246 |
| XM_021620131.2 | mRNA | downstream | 842432 | 10172015 ~ 10175528 (+) | False | LOC110535246 |
| XM_021620130.2 | mRNA | downstream | 843205 | 10172788 ~ 10175528 (+) | True | LOC110535246 |
| TU1072646 | other | upstream | 463595 | 8852494 ~ 8855437 (+) | True | LOC118937463 |
| TU1072537 | other | upstream | 666511 | 8651504 ~ 8652521 (+) | False | G940376 |
| TU1072470 | other | upstream | 778165 | 8532540 ~ 8540867 (+) | True | G940313 |
| TU1072364 | other | upstream | 879257 | 8439480 ~ 8439775 (+) | True | G940247 |
| TU1072200 | other | upstream | 937452 | 8379847 ~ 8381580 (+) | False | LOC110536544 |
| TU1074217 | other | downstream | 915526 | 10245109 ~ 10245506 (+) | True | G941893 |
| TU1075144 | other | downstream | 1781143 | 11110726 ~ 11111336 (+) | True | G942702 |
| TU1077607 | other | downstream | 4057967 | 13387550 ~ 13394875 (+) | True | G944957 |
| TU1079178 | other | downstream | 4734965 | 14064548 ~ 14065869 (+) | True | G946426 |
| TU1079304 | other | downstream | 4825771 | 14155354 ~ 14170877 (+) | False | LOC110535304 |
