Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001160650.2 |
| length | 1209 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | vapa |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10666207 ~ 10671992 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1074451 | lncRNA | upstream | 18919 | 10646468 ~ 10647288 (+) | True | G942106 |
| TU1074313 | lncRNA | upstream | 24423 | 10639997 ~ 10641784 (+) | True | G941976 |
| TU1074441 | lncRNA | upstream | 44560 | 10621448 ~ 10621647 (+) | True | G942096 |
| TU1074438 | lncRNA | upstream | 61100 | 10604902 ~ 10605107 (+) | True | G942093 |
| TU1074437 | lncRNA | upstream | 63408 | 10602556 ~ 10602799 (+) | True | G942092 |
| TU1074471 | lncRNA | downstream | 14458 | 10686043 ~ 10686884 (+) | True | G942123 |
| TU1074472 | lncRNA | downstream | 15779 | 10687364 ~ 10687579 (+) | True | G942124 |
| TU1074489 | lncRNA | downstream | 26113 | 10697698 ~ 10704427 (+) | True | G942134 |
| TU1074493 | lncRNA | downstream | 35000 | 10706585 ~ 10706898 (+) | True | G942138 |
| TU1074500 | lncRNA | downstream | 38248 | 10709833 ~ 10711750 (+) | False | G942140 |
| XM_021620141.2 | mRNA | upstream | 26785 | 10631364 ~ 10639422 (+) | True | LOC110535252 |
| XM_036934818.1 | mRNA | upstream | 42187 | 10395438 ~ 10624020 (+) | False | LOC110536547 |
| XM_036934819.1 | mRNA | upstream | 42187 | 10395438 ~ 10624020 (+) | False | LOC110536547 |
| XM_036934820.1 | mRNA | upstream | 42187 | 10395439 ~ 10624020 (+) | True | LOC110536547 |
| XM_036934816.1 | mRNA | upstream | 298528 | 10315393 ~ 10367679 (+) | False | LOC110535248 |
| XM_021620151.2 | mRNA | downstream | 354052 | 11025637 ~ 11064599 (+) | False | LOC110535262 |
| XM_021620152.2 | mRNA | downstream | 368044 | 11039629 ~ 11064599 (+) | True | LOC110535262 |
| XM_021620153.2 | mRNA | downstream | 484095 | 11155680 ~ 11158395 (+) | True | LOC110535263 |
| XM_036934852.1 | mRNA | downstream | 506747 | 11178332 ~ 11497838 (+) | False | LOC110535264 |
| XM_036934853.1 | mRNA | downstream | 506747 | 11178332 ~ 11497838 (+) | False | LOC110535264 |
| TU1074217 | other | upstream | 420701 | 10245109 ~ 10245506 (+) | True | G941893 |
| TU1072646 | other | upstream | 1810770 | 8852494 ~ 8855437 (+) | True | LOC118937463 |
| TU1072537 | other | upstream | 2013686 | 8651504 ~ 8652521 (+) | False | G940376 |
| TU1072470 | other | upstream | 2125340 | 8532540 ~ 8540867 (+) | True | G940313 |
| TU1072364 | other | upstream | 2226432 | 8439480 ~ 8439775 (+) | True | G940247 |
| TU1075144 | other | downstream | 439141 | 11110726 ~ 11111336 (+) | True | G942702 |
| TU1077607 | other | downstream | 2715965 | 13387550 ~ 13394875 (+) | True | G944957 |
| TU1079178 | other | downstream | 3392963 | 14064548 ~ 14065869 (+) | True | G946426 |
| TU1079304 | other | downstream | 3483769 | 14155354 ~ 14170877 (+) | False | LOC110535304 |
| TU1079302 | other | downstream | 3499957 | 14171542 ~ 14202999 (+) | True | LOC110535304 |
