Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1079876 |
| length | 1064 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC110535322 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14665667 ~ 14715423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1079885 | lncRNA | upstream | 18025 | 14696113 ~ 14696330 (+) | True | G947048 |
| TU1079866 | lncRNA | upstream | 42397 | 14665726 ~ 14671958 (+) | False | LOC110535322 |
| TU1079859 | lncRNA | upstream | 45109 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| TU1079861 | lncRNA | upstream | 45109 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| TU1079868 | lncRNA | upstream | 45109 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| TU1079894 | lncRNA | downstream | 3030 | 14718448 ~ 14718683 (+) | True | G947057 |
| TU1079896 | lncRNA | downstream | 6548 | 14721966 ~ 14722170 (+) | True | G947059 |
| TU1080072 | lncRNA | downstream | 26933 | 14742351 ~ 14742560 (+) | True | G947207 |
| TU1080118 | lncRNA | downstream | 57951 | 14773369 ~ 14773842 (+) | True | G947252 |
| TU1080120 | lncRNA | downstream | 58585 | 14774003 ~ 14777036 (+) | True | G947254 |
| XR_002475239.2 | mRNA | upstream | 45219 | 14665668 ~ 14669136 (+) | False | LOC110535322 |
| XR_002475240.2 | mRNA | upstream | 45236 | 14665668 ~ 14669119 (+) | False | LOC110535322 |
| XM_021620247.2 | mRNA | upstream | 50795 | 14660285 ~ 14663560 (+) | False | LOC110535321 |
| XM_021620246.2 | mRNA | upstream | 50795 | 14660288 ~ 14663560 (+) | True | LOC110535321 |
| XM_036934965.1 | mRNA | upstream | 54916 | 14645642 ~ 14659439 (+) | False | ppp1r42 |
| NM_001124627.1 | mRNA | downstream | 77777 | 14793195 ~ 14794694 (+) | True | crf |
| trnay-gua-3 | mRNA | downstream | 115358 | 14830776 ~ 14830861 (+) | True | trnay-gua-3 |
| XM_021620256.2 | mRNA | downstream | 125235 | 14840653 ~ 14882192 (+) | False | LOC110535327 |
| XM_021620258.2 | mRNA | downstream | 125235 | 14840653 ~ 14882192 (+) | False | LOC110535327 |
| XM_021620259.2 | mRNA | downstream | 125235 | 14840653 ~ 14882192 (+) | True | LOC110535327 |
| TU1079869 | other | upstream | 44599 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1079817 | other | upstream | 130306 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079455 | other | upstream | 312711 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1079453 | other | upstream | 314082 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1079402 | other | upstream | 385019 | 14318665 ~ 14329336 (+) | True | G946642 |
| TU1080168 | other | downstream | 171196 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1080689 | other | downstream | 569761 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080897 | other | downstream | 722263 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | downstream | 722263 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080953 | other | downstream | 872412 | 15587830 ~ 15589776 (+) | True | rnf6 |
