Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021620264.2 |
| length | 1740 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 6 |
| gene id | LOC110535328 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14830974 ~ 14840659 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K09525 | DNAJC5; DnaJ homolog subfamily C member 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080223 | lncRNA | downstream | 5345 | 14815513 ~ 14825629 (-) | True | LOC110535326 |
| TU1080218 | lncRNA | downstream | 22230 | 14808409 ~ 14808744 (-) | True | G947347 |
| TU1080215 | lncRNA | downstream | 25176 | 14805512 ~ 14805798 (-) | True | G947344 |
| TU1080128 | lncRNA | downstream | 49580 | 14781113 ~ 14781394 (-) | True | G947262 |
| TU1080108 | lncRNA | downstream | 62601 | 14768100 ~ 14768373 (-) | True | G947242 |
| TU1080270 | lncRNA | upstream | 47186 | 14887845 ~ 14888305 (-) | True | G947397 |
| TU1080271 | lncRNA | upstream | 50620 | 14891279 ~ 14891990 (-) | True | mtfr1 |
| TU1080280 | lncRNA | upstream | 64909 | 14905568 ~ 14906913 (-) | True | G947407 |
| TU1080313 | lncRNA | upstream | 95213 | 14935872 ~ 14936076 (-) | True | G947439 |
| TU1080385 | lncRNA | upstream | 148157 | 14988816 ~ 14989049 (-) | True | G947511 |
| XR_002475241.2 | mRNA | downstream | 5375 | 14815506 ~ 14825599 (-) | False | LOC110535326 |
| XR_005034576.1 | mRNA | downstream | 5375 | 14815506 ~ 14825599 (-) | False | LOC110535326 |
| LOC110536555 | mRNA | downstream | 19999 | 14797797 ~ 14810975 (-) | True | LOC110536555 |
| XM_021620255.2 | mRNA | downstream | 97944 | 14731383 ~ 14733030 (-) | True | LOC110535325 |
| XM_021620254.2 | mRNA | downstream | 134887 | 14675757 ~ 14696087 (-) | True | sgk3 |
| XM_021620266.2 | mRNA | upstream | 43658 | 14884317 ~ 14897579 (-) | False | mtfr1 |
| XM_021620269.2 | mRNA | upstream | 239865 | 15080524 ~ 15082767 (-) | True | LOC110535332 |
| XM_036936642.1 | mRNA | upstream | 378347 | 15219006 ~ 15221030 (-) | True | LOC118937468 |
| XM_021620270.2 | mRNA | upstream | 410612 | 15251271 ~ 15268657 (-) | True | LOC110535333 |
| XM_036934988.1 | mRNA | upstream | 598756 | 15439415 ~ 15455905 (-) | False | pan3 |
| TU1079569 | other | downstream | 515288 | 14312512 ~ 14315686 (-) | True | ly86 |
| TU1078013 | other | downstream | 2436836 | 12393397 ~ 12394138 (-) | True | G945345 |
| TU1076845 | other | downstream | 2472095 | 12348249 ~ 12358879 (-) | True | LOC110536549 |
| TU1075312 | other | downstream | 3750457 | 11078431 ~ 11080517 (-) | False | LOC110536548 |
| TU1075313 | other | downstream | 3753953 | 11074711 ~ 11077021 (-) | False | LOC110536548 |
| TU1080269 | other | upstream | 43676 | 14884335 ~ 14886724 (-) | False | mtfr1 |
| TU1080652 | other | upstream | 365772 | 15206431 ~ 15209597 (-) | True | G947750 |
| TU1080827 | other | upstream | 525291 | 15365950 ~ 15366301 (-) | True | G947894 |
| TU1081124 | other | upstream | 610668 | 15451327 ~ 15455744 (-) | True | pan3 |
| TU1081160 | other | upstream | 640009 | 15480668 ~ 15485240 (-) | False | pdx1 |
